Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | BN612_01280 | Not Available | Positive | 169276 - 169995 | 26189.9 |
| arsenate reductase (thioredoxin) | BN612_01281 | Not Available | Positive | 170019 - 170441 | 15533.4 |
| tigr02453 family protein | BN612_01282 | Not Available | Negative | 170650 - 171336 | 26558.4 |
| glycoside hydrolase family 3 domain protein | BN612_01283 | Not Available | Positive | 171451 - 171930 | 17427.1 |
| unknown | BN612_01284 | Not Available | Negative | 171738 - 172265 | 20120.3 |
| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein | BN612_01285 | Not Available | Positive | 172296 - 173243 | 33945.3 |
| putative uncharacterized protein | BN612_01286 | Not Available | Negative | 173367 - 175661 | 88624.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BN612_01287 | Not Available | Negative | 176522 - 177817 | 48034.4 |
| dihydropteroate synthase | BN612_01288 | Not Available | Positive | 177935 - 178819 | 32966.8 |
| tigr00159 family protein | BN612_01289 | Not Available | Positive | 178822 - 179595 | 28804.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


