Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uncharacterized protein | BN612_02313 | Not Available | Positive | 1656933 - 1657613 | 25239.6 |
| putative uncharacterized protein | BN612_02314 | Not Available | Positive | 1657738 - 1658568 | 31205.9 |
| putative uncharacterized protein | BN612_02315 | Not Available | Positive | 1658582 - 1660054 | 56040.6 |
| putative uncharacterized protein | BN612_02316 | Not Available | Positive | 1660092 - 1662194 | 78732.0 |
| putative uncharacterized protein | BN612_02317 | Not Available | Positive | 1662215 - 1664998 | 103983.0 |
| endonuclease/exonuclease/phosphatase family protein | BN612_02318 | Not Available | Positive | 1665141 - 1667054 | 71432.3 |
| dna mismatch endonuclease vsr | BN612_02319 | Not Available | Negative | 1667611 - 1668105 | 19572.0 |
| llaji restriction endonuclease | BN612_02320 | Not Available | Negative | 1668626 - 1670755 | 83371.5 |
| type ii restriction-modification system restriction subunit | BN612_02321 | Not Available | Negative | 1670759 - 1672762 | 75759.4 |
| cytosine-specific methyltransferase | BN612_02322 | Not Available | Negative | 1672759 - 1673784 | 39011.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


