Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | BN612_02238 | Not Available | Negative | 1567019 - 1567207 | 7205.97 |
| 50s ribosomal protein l28 | BN612_02239 | Not Available | Negative | 1567227 - 1567397 | 6371.78 |
| 50s ribosomal protein l28 | BN612_02240 | Not Available | Negative | 1567423 - 1567593 | 6659.05 |
| competence/damage-inducible domain protein cina | BN612_02241 | Not Available | Negative | 1567697 - 1568197 | 17767.1 |
| probable trna threonylcarbamoyladenosine biosynthesis protein gcp | BN612_02242 | Not Available | Negative | 1568217 - 1569242 | 36964.4 |
| methionine aminopeptidase | BN612_02243 | Not Available | Negative | 1569267 - 1570121 | 31571.8 |
| putative uncharacterized protein | BN612_02244 | Not Available | Positive | 1570363 - 1570581 | 8300.68 |
| mgtc/sapb transporter | BN612_02245 | Not Available | Negative | 1570809 - 1571489 | 24773.0 |
| cof-like hydrolase | BN612_02246 | Not Available | Positive | 1571582 - 1572391 | 30552.3 |
| uncharacterized protein | BN612_02247 | Not Available | Negative | 1572378 - 1572911 | 19391.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


