Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uncharacterized protein | BN612_02198 | Not Available | Positive | 1521519 - 1523369 | 69161.6 |
| putative rod shape-determining protein roda | BN612_02199 | Not Available | Positive | 1523350 - 1524801 | 54219.6 |
| putative uncharacterized protein | BN612_02200 | Not Available | Negative | 1524749 - 1525300 | 19943.6 |
| psp1 c-terminal domain protein | BN612_02201 | Not Available | Negative | 1525326 - 1526897 | 58300.9 |
| dna polymerase iii gamma/tau subunit | BN612_02202 | Not Available | Negative | 1527062 - 1528189 | 43360.9 |
| methylenetetrahydrofolate reductase | BN612_02203 | Not Available | Negative | 1528230 - 1529183 | 35845.0 |
| putative alpha-1 2-mannosidase | BN612_02204 | Not Available | Negative | 1529466 - 1531658 | 81837.7 |
| mannose-6-phosphate isomerase | BN612_02205 | Not Available | Negative | 1531671 - 1532642 | 35957.2 |
| uncharacterized protein | BN612_02206 | Not Available | Negative | 1532880 - 1533359 | 16918.5 |
| unknown | BN612_02207 | Not Available | Negative | 1533642 - 1533797 | 5897.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


