Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n5-carboxyaminoimidazole ribonucleotide mutase | BN612_00259 | Not Available | Positive | 1484466 - 1484975 | 17722.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BN612_00260 | Not Available | Positive | 1484975 - 1486831 | 68613.1 |
| uncharacterized protein | BN612_02171 | Not Available | Positive | 1486950 - 1488443 | 55967.0 |
| uncharacterized protein | BN612_02172 | Not Available | Positive | 1488478 - 1491114 | 98943.4 |
| putative uncharacterized protein | BN612_02173 | Not Available | Positive | 1491258 - 1493024 | 68061.9 |
| cytochrome c binding protein | BN612_02174 | Not Available | Positive | 1493039 - 1494493 | 55473.8 |
| uncharacterized protein | BN612_02175 | Not Available | Positive | 1494603 - 1494935 | 12451.8 |
| putative sec-independent protein translocase | BN612_02176 | Not Available | Positive | 1495214 - 1496026 | 31363.1 |
| ribosomal protein s12 bacterial-type | BN612_02177 | Not Available | Positive | 1496221 - 1496625 | 14664.0 |
| 30s ribosomal protein s7 | BN612_02178 | Not Available | Positive | 1496785 - 1497261 | 18148.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


