Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | BN612_00245 | Not Available | Positive | 1416372 - 1417562 | 43611.4 |
| Trna-arg | Not Available | Not Available | Positive | 1417648 - 1417722 | Not Available |
| 2-oxoacid:acceptor oxidoreductase alpha subunit | BN612_00246 | Not Available | Positive | 1417887 - 1419740 | 67209.9 |
| putative uncharacterized protein | BN612_00247 | Not Available | Positive | 1419744 - 1420754 | 36648.6 |
| putative membrane protein | BN612_02148 | Not Available | Positive | 1420912 - 1421250 | 13008.0 |
| linear amide c-n hydrolase choloylglycine hydrolase family protein | BN612_02149 | Not Available | Negative | 1421345 - 1422490 | 42224.5 |
| alcohol dehydrogenase iron-dependent | BN612_02150 | Not Available | Positive | 1422691 - 1423863 | 42747.7 |
| conserved domain protein | BN612_02151 | Not Available | Positive | 1424179 - 1425030 | 32055.3 |
| tonb-linked outer membrane protein susc/raga family | BN612_02152 | Not Available | Positive | 1425793 - 1428759 | 109890.0 |
| secreted protein containing tonb-dependent receptor plug domain protein | BN612_02153 | Not Available | Positive | 1429219 - 1432557 | 123090.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


