Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uncharacterized protein | BN612_00235 | Not Available | Positive | 1400778 - 1401695 | 34182.1 |
| putative uncharacterized protein | BN612_00236 | Not Available | Positive | 1401727 - 1402383 | 25605.2 |
| putative uncharacterized protein | BN612_00237 | Not Available | Negative | 1402721 - 1406050 | 126907.0 |
| putative uncharacterized protein | BN612_00238 | Not Available | Positive | 1406206 - 1406886 | 25509.8 |
| peptidase s54 rhomboid domain | BN612_00239 | Not Available | Positive | 1406861 - 1407754 | 33944.7 |
| endonuclease/exonuclease/phosphatase family protein | BN612_00240 | Not Available | Positive | 1407764 - 1408834 | 40100.7 |
| putative uncharacterized protein | BN612_00241 | Not Available | Positive | 1408854 - 1410947 | 79213.9 |
| putative uncharacterized protein | BN612_00242 | Not Available | Positive | 1411085 - 1414051 | 108282.0 |
| membrane protein containing duf340 prokaryotic membrane | BN612_00243 | Not Available | Positive | 1414216 - 1415136 | 32906.1 |
| nad dependent nucleotide-diphosphate-sugar epimerase | BN612_00244 | Not Available | Negative | 1415280 - 1416236 | 35416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


