Ruminococcus sp. CAG:403 str. MGS:403

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. CAG:403 str. MGS:403 is a Gram-positive bacterium characterized by its cocci shape. One notable feature of this strain is the presence of flagella, which may play a role in its motility and ecological interactions within its environment. The strain possesses a single replicon, indicating its genomic organization is relatively simple, which can be a trait of some bacteria that thrive in specialized niches. The accession number for Ruminococcus sp. CAG:403 str. MGS:403 is CBIS000000000.1, which can be used for further reference and information retrieval regarding its genomic data. Understanding the characteristics of Ruminococcus sp. CAG:403 str. MGS:403 is important for elucidating its role in the microbiome, particularly in ruminants, where such bacteria are often involved in the fermentation of complex carbohydrates. The presence of flagella suggests that this bacterium could navigate through the gastrointestinal tract, potentially influencing its interactions with other microbial species and host metabolism. The cocci shape may also provide certain advantages in specific environmental conditions, such as resistance to shear forces in the gut. In summary, Ruminococcus sp. CAG:403 str. MGS:403 is a motile, Gram-positive cocci with a single replicon, contributing to our understanding of microbial diversity and function in complex ecosystems like the ruminant gut.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. CAG:403
StrainMGS:403

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. CAG:403 str. MGS:403
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. CAG:403 str. MGS:403


Gene Summary

Adenine Count

597133 bp

Thymine Count

598410 bp

Guanine Count

507020 bp

Cytosine Count

496997 bp

Genome Length

2199684 bp

Protein-coding Genes

1936 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Phage holinBN645_01120Not AvailableNegative299899 - 30033315382.3
Asch domain-containing proteinBN645_01121Not AvailableNegative300408 - 3005274364.46
putative uncharacterized proteinBN645_01122Not AvailableNegative300544 - 30080710217.8
Tail proteinBN645_01123Not AvailableNegative300810 - 30261264298.6
Hypothetical proteinBN645_01124Not AvailableNegative302630 - 30341829198.9
Putative baseplate-j proteinBN645_01125Not AvailableNegative303415 - 30461443629.8
Hypothetical proteinBN645_01126Not AvailableNegative304614 - 30501815918.8
Hypothetical proteinBN645_01127Not AvailableNegative305015 - 30571924632.8
Putative phage cell wall hydrolaseBN645_01128Not AvailableNegative305712 - 30669237342.8
Putative cell wall hydrolase/lysm proteinBN645_01129Not AvailableNegative306708 - 30739125522.7

Displaying genes 1 – 10 of 2002 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

135 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 135 metabolites

Health Effects

No health effects information available for this bacterium.