Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger profundus |
| Strain | JLT2016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Salipiger profundus strain JLT2016 plasmid pTPRO4, complete
Gene Summary
Adenine Count
4838 bp
Thymine Count
4598 bp
Guanine Count
7808 bp
Cytosine Count
7875 bp
Genome Length
25119 bp
Protein-coding Genes
25 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin--nadp reductase | Ga0080559_RS27160 | Not Available | Positive | 49693 - 50445 | 27164.3 |
| transposase | Ga0080559_RS27015 | Not Available | Negative | 50827 - 51225 | 15081.2 |
| strawberry notch c-terminal domain-containing protein | Ga0080559_RS24300 | Not Available | Positive | 51330 - 52514 | 43136.3 |
| toprim domain-containing protein | Ga0080559_RS24305 | Not Available | Positive | 52511 - 53578 | 38427.6 |
| duf2493 domain-containing protein | Ga0080559_RS24310 | Not Available | Positive | 53859 - 54770 | 33692.2 |
| helix-turn-helix domain-containing protein | Ga0080559_RS24315 | Not Available | Negative | 54779 - 55072 | 10276.3 |
| type ii toxin-antitoxin system rele/pare family toxin | Ga0080559_RS24320 | Not Available | Negative | 55069 - 55410 | 12129.7 |
| duf736 domain-containing protein | Ga0080559_RS24330 | Not Available | Positive | 56051 - 56389 | 12134.5 |
| plasmid partitioning protein repa | Ga0080559_RS24335 | Not Available | Positive | 56589 - 57773 | 43594.0 |
| plasmid partitioning protein repb | Ga0080559_RS24340 | Not Available | Positive | 57797 - 58744 | 34097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
