Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger profundus |
| Strain | JLT2016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Salipiger profundus strain JLT2016 chromosome, complete genome.
Gene Summary
Adenine Count
757370 bp
Thymine Count
760186 bp
Guanine Count
1543445 bp
Cytosine Count
1548583 bp
Genome Length
4609584 bp
Protein-coding Genes
4303 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Ga0080559_RS23910 | Not Available | Positive | 245 - 580 | 12105.3 |
| hypothetical protein | Ga0080559_RS27340 | Not Available | Negative | 654 - 848 | 7423.16 |
| transposase | Ga0080559_RS23915 | Not Available | Positive | 1096 - 2346 | 45920.1 |
| mobq family relaxase | Ga0080559_RS23920 | Not Available | Positive | 2936 - 4426 | 55702.8 |
| dna-binding protein | Ga0080559_RS23925 | Not Available | Negative | 4696 - 5013 | 11737.7 |
| type ii toxin-antitoxin system vapc family toxin | Ga0080559_RS23930 | Not Available | Negative | 5016 - 5405 | 13671.6 |
| abrb/maze/spovt family dna-binding domain-containing protein | Ga0080559_RS23935 | Not Available | Negative | 5414 - 5677 | 9893.84 |
| hypothetical protein | Ga0080559_RS26455 | Not Available | Negative | 5862 - 6020 | 6129.31 |
| replication initiator protein a | Ga0080559_RS23940 | Not Available | Positive | 6264 - 7295 | 39426.1 |
| helix-turn-helix domain-containing protein | Ga0080559_RS23945 | Not Available | Positive | 7490 - 7741 | 9262.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
