Hymenobacter swuensis DY53

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter swuensis DY53 is a Gram-negative, rod-shaped bacterium characterized by possessing four replicons. Its genetic material is represented in several accessions, specifically NZ_CP007143.1, NZ_CP007145.1, NZ_CP007146.1, and NZ_CP007144.1. The multiple replicons suggest a complex genomic organization, which may contribute to its adaptability in various environments. This characteristic is often associated with bacteria that inhabit diverse ecological niches, allowing them to efficiently manage and replicate their genetic information. The Gram-negative nature of H. swuensis DY53 indicates that it has a thinner peptidoglycan layer compared to Gram-positive bacteria, which may influence its susceptibility to certain antibiotics and its interactions with other microorganisms in its habitat. As a member of the Hymenobacter genus, H. swuensis DY53 is likely to play a role in nutrient cycling and may contribute to soil or aquatic ecosystems, where it can impact the microbial community dynamics. The presence of multiple replicons in its genome could provide it with evolutionary advantages, such as increased genetic diversity and resilience to environmental stresses. This insight into the genomic architecture of H. swuensis DY53 underscores its potential ecological importance in maintaining the balance within its microbial community.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter swuensis
StrainDY53

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter swuensis DY53 plasmid pHsw2, complete sequence.

Gene Summary

Adenine Count

9123 bp

Thymine Count

10301 bp

Guanine Count

11084 bp

Cytosine Count

11054 bp

Genome Length

41562 bp

Protein-coding Genes

44 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6268 family outer membrane beta-barrel proteinHSW_RS19770Not AvailableNegative4291787 - 429291442676.1
bama/tama family outer membrane proteinHSW_RS19775Not AvailableNegative4293098 - 4297000146063.0
pycsar system effector family proteinHSW_RS19780Not AvailablePositive4297328 - 429856946550.5
duf2652 domain-containing proteinHSW_RS23175Not AvailableNegative4298772 - 429992343145.2
Trna-argNot AvailableNot AvailablePositive4300244 - 4300315Not Available
dna methyltransferaseHSW_RS19795Not AvailableNegative4300621 - 4304064127173.0
response regulator transcription factorHSW_RS19800Not AvailableNegative4304344 - 430501824411.9
pas domain s-box proteinHSW_RS19805Not AvailablePositive4305160 - 430737982544.1
stas domain-containing proteinHSW_RS19810Not AvailablePositive4307523 - 430789713923.0
duf1345 domain-containing proteinHSW_RS19815Not AvailableNegative4307892 - 430858124410.3

Displaying genes 3751 – 3760 of 4522 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.