Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 82 - 1594 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 110 - 3019 | Not Available |
| hypothetical protein | EI293_00005 | Not Available | Negative | 410 - 766 | 13353.4 |
| adenylosuccinate synthase | EI293_00010 | Not Available | Negative | 1026 - 2297 | 46890.0 |
| anti-sigma factor antagonist | EI293_00015 | Not Available | Negative | 2297 - 2644 | 12412.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3121 - 3232 | Not Available |
| transcriptional repressor | EI293_00020 | Not Available | Negative | 2641 - 3132 | 18839.6 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | EI293_00025 | Not Available | Negative | 3275 - 5482 | 84595.6 |
| Trna-leu | Not Available | Not Available | Positive | 5801 - 5882 | Not Available |
| trigger factor | EI293_00035 | Not Available | Positive | 6005 - 7333 | 50187.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
