Hymenobacter swuensis DY53

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter swuensis DY53 is a Gram-negative, rod-shaped bacterium characterized by possessing four replicons. Its genetic material is represented in several accessions, specifically NZ_CP007143.1, NZ_CP007145.1, NZ_CP007146.1, and NZ_CP007144.1. The multiple replicons suggest a complex genomic organization, which may contribute to its adaptability in various environments. This characteristic is often associated with bacteria that inhabit diverse ecological niches, allowing them to efficiently manage and replicate their genetic information. The Gram-negative nature of H. swuensis DY53 indicates that it has a thinner peptidoglycan layer compared to Gram-positive bacteria, which may influence its susceptibility to certain antibiotics and its interactions with other microorganisms in its habitat. As a member of the Hymenobacter genus, H. swuensis DY53 is likely to play a role in nutrient cycling and may contribute to soil or aquatic ecosystems, where it can impact the microbial community dynamics. The presence of multiple replicons in its genome could provide it with evolutionary advantages, such as increased genetic diversity and resilience to environmental stresses. This insight into the genomic architecture of H. swuensis DY53 underscores its potential ecological importance in maintaining the balance within its microbial community.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter swuensis
StrainDY53

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter swuensis DY53 plasmid pHsw2, complete sequence.

Gene Summary

Adenine Count

9123 bp

Thymine Count

10301 bp

Guanine Count

11084 bp

Cytosine Count

11054 bp

Genome Length

41562 bp

Protein-coding Genes

44 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lamin tail domain-containing proteinHSW_RS19270Not AvailableNegative4155382 - 415799192418.8
aspartate-semialdehyde dehydrogenaseHSW_RS19275Not AvailablePositive4158110 - 415910536451.0
alpha/beta fold hydrolaseHSW_RS19280Not AvailableNegative4159183 - 415993828391.2
hypothetical proteinHSW_RS19285Not AvailablePositive4160040 - 416105037331.8
ycei family proteinHSW_RS19290Not AvailableNegative4161145 - 416167819346.6
1-deoxy-d-xylulose-5-phosphate synthaseHSW_RS19295Not AvailableNegative4161900 - 416384370958.3
lysylphosphatidylglycerol synthase transmembrane domain-containing proteinHSW_RS19300Not AvailablePositive4164136 - 416522140446.9
erythromycin esterase family proteinHSW_RS19305Not AvailableNegative4165308 - 416789994961.1
lipocalin family proteinHSW_RS19310Not AvailableNegative4168078 - 416849714966.8
lysm peptidoglycan-binding domain-containing proteinHSW_RS19315Not AvailablePositive4168739 - 416903210169.8

Displaying genes 3651 – 3660 of 4522 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.