Hymenobacter swuensis DY53

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter swuensis DY53 is a Gram-negative, rod-shaped bacterium characterized by possessing four replicons. Its genetic material is represented in several accessions, specifically NZ_CP007143.1, NZ_CP007145.1, NZ_CP007146.1, and NZ_CP007144.1. The multiple replicons suggest a complex genomic organization, which may contribute to its adaptability in various environments. This characteristic is often associated with bacteria that inhabit diverse ecological niches, allowing them to efficiently manage and replicate their genetic information. The Gram-negative nature of H. swuensis DY53 indicates that it has a thinner peptidoglycan layer compared to Gram-positive bacteria, which may influence its susceptibility to certain antibiotics and its interactions with other microorganisms in its habitat. As a member of the Hymenobacter genus, H. swuensis DY53 is likely to play a role in nutrient cycling and may contribute to soil or aquatic ecosystems, where it can impact the microbial community dynamics. The presence of multiple replicons in its genome could provide it with evolutionary advantages, such as increased genetic diversity and resilience to environmental stresses. This insight into the genomic architecture of H. swuensis DY53 underscores its potential ecological importance in maintaining the balance within its microbial community.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter swuensis
StrainDY53

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter swuensis DY53 plasmid pHsw2, complete sequence.

Gene Summary

Adenine Count

9123 bp

Thymine Count

10301 bp

Guanine Count

11084 bp

Cytosine Count

11054 bp

Genome Length

41562 bp

Protein-coding Genes

44 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp_02308HSW_RS12950Not AvailableNegative2693968 - 2694564Not Available
putative porinHSW_RS12955Not AvailableNegative2694680 - 269674077784.9
tetraacyldisaccharide 4'-kinaseHSW_RS12960Not AvailableNegative2696733 - 269780038905.1
protein phosphatase 2c domain-containing proteinHSW_RS12965Not AvailablePositive2698001 - 269874127661.2
smug2 dna glycosylase family proteinHSW_RS12970Not AvailablePositive2698750 - 269943325788.4
nif3-like dinuclear metal center hexameric proteinHSW_RS12975Not AvailablePositive2699572 - 270067239781.9
zinc ribbon domain-containing proteinHSW_RS12980Not AvailablePositive2700662 - 270141428528.8
hypothetical proteinHSW_RS12985Not AvailablePositive2701473 - 270295755877.4
aminodeoxychorismate synthase component iHSW_RS12990Not AvailablePositive2703014 - 270429747601.0
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabHSW_RS12995Not AvailablePositive2704580 - 270604054893.3

Displaying genes 2411 – 2420 of 4522 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.