Paenibacillus alvei DSM 29

RodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus alvei DSM 29 is a Gram-variable, rod-shaped bacterium. It is classified as a facultative anaerobe, indicating that it can grow in both aerobic and anaerobic conditions, which allows it to thrive in diverse environments. This adaptability is an important trait for survival in fluctuating ecological niches. The strain DSM 29 is characterized by having four replicons, which suggests a complex genomic structure that may contribute to its metabolic versatility and capacity for adaptation. The available genetic data for this organism includes several accessions: NZ_AMBZ01000025.1, AMBZ00000000.1, NZ_AMBZ01000023.1, and NZ_AMBZ01000024.1, indicating that its genomic information is documented and accessible for further research. The ability of Paenibacillus alvei DSM 29 to thrive in varying oxygen levels may provide insights into its ecological role, potentially contributing to nutrient cycling in various environments. Its presence in soil and plant-associated habitats suggests it may play a part in plant growth promotion and soil health, reinforcing the importance of microbial diversity in ecosystem functioning. Understanding the traits of Paenibacillus alvei DSM 29 can help inform its applications in agriculture or bioremediation efforts, emphasizing the significance of this bacterium in ecological contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus alvei
StrainDSM 29

Profile

Physiology
Gram staining propertiesVariable
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus alvei DSM 29 plasmid pPAV109, whole genome shotgun

Gene Summary

Adenine Count

34427 bp

Thymine Count

30813 bp

Guanine Count

24258 bp

Cytosine Count

19930 bp

Genome Length

109428 bp

Protein-coding Genes

120 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPAV_RS31955P18016Positive101 - 135448634.8
hypothetical proteinPAV_RS35175Not AvailablePositive1531 - 189613427.6
merr family transcriptional regulatorPAV_RS31965Not AvailablePositive2645 - 329224733.2
hypothetical proteinPAV_RS31970Not AvailablePositive3713 - 409315260.0
hypothetical proteinPAV_RS31975Not AvailablePositive4660 - 531323210.5
hypothetical proteinPAV_RS37110Not AvailablePositive5544 - 56664440.39
hypothetical proteinPAV_RS31980Not AvailablePositive6025 - 650417654.6
putative holin-like toxinPAV_RS35500Not AvailableNegative6926 - 70695599.06
hypothetical proteinPAV_RS31985Not AvailableNegative7625 - 78076279.91
hypothetical proteinPAV_RS31990Not AvailableNegative7800 - 79887177.34

Displaying genes 1 – 10 of 6897 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.