Xanthomonas graminis pv. arrhenatheri LMG 727

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas graminis pv. arrhenatheri LMG 727 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This species is part of the Xanthomonadaceae family and is notable for its single replicon, indicating a streamlined genetic organization. The strain is cataloged with the accession number CXOI00000000.1, which provides a reference for genetic and genomic studies. The rod shape and motility of Xanthomonas graminis pv. arrhenatheri are significant traits that may influence its ecological interactions and pathogenicity. As a member of the Xanthomonas genus, this bacterium is known for its role in plant pathology, particularly in affecting grasses. The ability to move effectively in plant environments could enhance its capacity to colonize host plants and establish infections. Understanding the biology of Xanthomonas graminis pv. arrhenatheri contributes to broader ecological insights regarding its interactions within grass ecosystems. The presence of flagella suggests an adaptive advantage in accessing nutrients or evading plant defense mechanisms. Investigating the ecological role of this bacterium could further illuminate its impact on plant health and the dynamics of grassland microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas graminis
Strainpv. arrhenatheri LMG 727

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas graminis pv. arrhenatheri LMG 727
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas graminis pv. arrhenatheri LMG 727


Gene Summary

Adenine Count

750847 bp

Thymine Count

753346 bp

Guanine Count

1619877 bp

Cytosine Count

1629137 bp

Genome Length

4753207 bp

Protein-coding Genes

3678 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive370 - 1902Not Available
o-acetylhomoserine sulfhydrylaseXTALMG727_0002Not AvailableNegative714 - 203647882.8
23s ribosomal rnaNot AvailableNot AvailablePositive2451 - 5328Not Available
serine-pyruvate aminotransferaseXTALMG727_0003Q46NS0Negative2558 - 322924511.2
5s ribosomal rnaNot AvailableNot AvailablePositive5501 - 5615Not Available
putative type iii effector proteinXTALMG727_0004Not AvailableNegative4011 - 616176596.0
hypothetical proteinXTALMG727_0005Not AvailableNegative6235 - 688523648.1
tonb-dependent outer membrane receptor proteinXTALMG727_0008Not AvailableNegative9327 - 1162483024.3
ribosomal protein s6 modification proteinXTALMG727_0009Q8PHK1Positive11934 - 1282731935.9
hypothetical proteinXTALMG727_0010Not AvailablePositive13225 - 134618657.25

Displaying genes 1 – 10 of 3734 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

260 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 260 metabolites

Health Effects

No health effects information available for this bacterium.