Nostocoides jenkinsii Ben 74

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Intrasporangiaceae

Genus

Nostocoides

Description

Nostocoides jenkinsii Ben 74 is characterized by having a single replicon, which is a significant trait for its genomic structure. The organism is cataloged under the accession number CAJC00000000.1, indicating its unique identification in genomic databases. This single-replicon structure may suggest a streamlined genomic organization, which can have implications for its adaptability and evolutionary processes. In microbial ecology, the number of replicons can affect replication rates and metabolic efficiencies, potentially influencing the organism's ecological role and interactions within its environment. Understanding the genomic framework of Nostocoides jenkinsii Ben 74 can provide insights into its functionalities and adaptations in various ecosystems. The simplicity of having one replicon may allow for more efficient resource utilization, which is a critical trait for survival in competitive environments. This trait could also suggest a specialization in ecological niches where rapid adaptability is advantageous. In summary, the genomic organization of Nostocoides jenkinsii Ben 74, particularly its single replicon, may play a crucial role in its ecological dynamics and adaptability, highlighting the importance of genomic structure in microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyIntrasporangiaceae
GenusNostocoides
SpeciesNostocoides jenkinsii
StrainBen 74

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nostocoides jenkinsii Ben 74


Gene Summary

Adenine Count

603124 bp

Thymine Count

600145 bp

Guanine Count

1290022 bp

Cytosine Count

1295295 bp

Genome Length

3788586 bp

Protein-coding Genes

3816 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-glucose 4-epimeraseBN13_10001P09147Positive186 - 120536957.6
lysophospholipaseBN13_10002Not AvailablePositive1232 - 215232735.1
putative alpha/beta hydrolase fold proteinBN13_10003Not AvailableNegative2195 - 308532349.2
hypothetical proteinBN13_10004Not AvailableNegative3299 - 539574735.7
hypothetical proteinBN13_10005Not AvailableNegative5699 - 59599302.21
hypothetical proteinBN13_10006Not AvailableNegative5956 - 634814329.8
putative oxidoreductaseBN13_10007P61159Positive6404 - 859978432.0
cytochrome bd ubiquinol oxidase (subunit i)BN13_10008P94364Positive8748 - 1018452978.7
cytochrome bd ubiquinol oxidase (subunit ii)BN13_10009P94365Positive10202 - 1125438110.7
putative abc transporterBN13_10010P94366Positive11260 - 1293357559.1

Displaying genes 1 – 10 of 3876 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

242 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da
BASm0000468D-galactono-1,5-lactoneC6H10O6Chemical structure of D-galactono-1,5-lactoneNot available
Average178.14Da
Monoisotopic178.047738052Da

Displaying 1–10 of 242 metabolites

Health Effects

No health effects information available for this bacterium.