Nostocoides jenkinsii Ben 74

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Intrasporangiaceae

Genus

Nostocoides

Description

Nostocoides jenkinsii Ben 74 is characterized by having a single replicon, which is a significant trait for its genomic structure. The organism is cataloged under the accession number CAJC00000000.1, indicating its unique identification in genomic databases. This single-replicon structure may suggest a streamlined genomic organization, which can have implications for its adaptability and evolutionary processes. In microbial ecology, the number of replicons can affect replication rates and metabolic efficiencies, potentially influencing the organism's ecological role and interactions within its environment. Understanding the genomic framework of Nostocoides jenkinsii Ben 74 can provide insights into its functionalities and adaptations in various ecosystems. The simplicity of having one replicon may allow for more efficient resource utilization, which is a critical trait for survival in competitive environments. This trait could also suggest a specialization in ecological niches where rapid adaptability is advantageous. In summary, the genomic organization of Nostocoides jenkinsii Ben 74, particularly its single replicon, may play a crucial role in its ecological dynamics and adaptability, highlighting the importance of genomic structure in microbial diversity and function.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyIntrasporangiaceae
GenusNostocoides
SpeciesNostocoides jenkinsii
StrainBen 74

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tetrasphaera jenkinsii Ben 74 WGS project CAJC00000000 data,

Gene Summary

Adenine Count

603124 bp

Thymine Count

600145 bp

Guanine Count

1290022 bp

Cytosine Count

1295295 bp

Genome Length

3788586 bp

Protein-coding Genes

3816 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBN13_1690001Not AvailablePositive1144442 - 114723197450.1
transposase (fragment)BN13_1690002P0CE53Negative1147371 - 114804224209.3
nitrate/nitrite transporterBN13_170001Not AvailablePositive1148801 - 115014447357.2
putative exported oxidoreductaseBN13_170002Q9I4D4Negative1150233 - 115077518700.2
hypothetical proteinBN13_170003Not AvailablePositive1150860 - 11509222373.02
hypothetical proteinBN13_170004Not AvailablePositive1150919 - 115137716513.4
hypothetical proteinBN13_170005A0QST8Negative1151417 - 115171311048.0
inosine-monophosphate dehydrogenaseBN13_170006Q8G3N6Positive1151986 - 115350353544.6
conserved hypothetical proteinBN13_170007P67243Negative1153589 - 115399314542.5
conserved hypothetical proteinBN13_170008Not AvailableNegative1153990 - 11542539220.85

Displaying genes 1151 – 1160 of 3876 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

242 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da
BASm0000468D-galactono-1,5-lactoneC6H10O6Chemical structure of D-galactono-1,5-lactoneNot available
Average178.14Da
Monoisotopic178.047738052Da

Displaying 1–10 of 242 metabolites

Health Effects

No health effects information available for this bacterium.