Methylobacterium tarhaniae str. DSM 25844

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium tarhaniae str. DSM 25844 is a Gram-negative, aerobic bacterium characterized by its rod shape and the presence of flagella, which enable motility. This strain thrives optimally at a temperature of 25°C and is classified as mesophilic, indicating its growth preference within moderate temperature ranges. Methylobacterium tarhaniae possesses a single replicon, a feature that contributes to its genetic stability and replication efficiency. The strain is cataloged under the accession number LABZ00000000.1, which allows for its identification and retrieval in genomic databases. Ecologically, Methylobacterium species are known to play significant roles in carbon cycling and nitrogen fixation in various environments, including soil and plant-associated habitats. Their ability to utilize methanol and other one-carbon compounds suggests that Methylobacterium tarhaniae may contribute to these processes in its natural ecosystem, potentially influencing plant health and soil fertility. Understanding the traits of this bacterium can provide insights into its ecological functions and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium tarhaniae
StrainDSM 25844

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium tarhaniae str. DSM 25844
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium tarhaniae str. DSM 25844


Gene Summary

Adenine Count

997429 bp

Thymine Count

996293 bp

Guanine Count

2376176 bp

Cytosine Count

2373524 bp

Genome Length

6743422 bp

Protein-coding Genes

5746 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive95 - 211Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive455 - 570Not Available
hydrolaseVQ03_00010Not AvailableNegative1683 - 249228546.9
mfs transporterVQ03_00015E3GC98Negative2516 - 374242039.8
hypothetical proteinVQ03_00020Not AvailableNegative4184 - 460015243.8
abc transporter permeaseVQ03_00025Not AvailableNegative5058 - 604735265.4
abc transporter permeaseVQ03_00030Not AvailableNegative6074 - 696131554.1
abc transporter permeaseVQ03_00035Not AvailableNegative7047 - 825242231.4
abc transporter permeaseVQ03_00040Not AvailableNegative8364 - 958442926.1
histidinol dehydrogenaseVQ03_00045Not AvailableNegative9617 - 1036626840.8

Displaying genes 1 – 10 of 5819 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

421 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000333(1R,4R)-bornane-2,5-dioneC10H14O2Chemical structure of (1R,4R)-bornane-2,5-dioneNot available
Average166.22Da
Monoisotopic166.0993797Da
BASm0000338(1R,4R,5R)-5-hydroxycamphorC10H16O2Chemical structure of (1R,4R,5R)-5-hydroxycamphorNot available
Average168.2328Da
Monoisotopic168.115029756Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 421 metabolites

Health Effects

No health effects information available for this bacterium.