Allocoleopsis franciscana PCC 7113

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Coleofasciculales

Family

Coleofasciculaceae

Genus

Allocoleopsis

Description

Allocoleopsis franciscana PCC 7113 is characterized by possessing nine replicons. This multiplicity of replicons may suggest a complex genomic architecture that could contribute to its adaptability and survival in various environments. The organism has several accessions recorded, which include NC_019762.1, NC_019761.1, NC_019760.1, NC_019743.1, NC_019741.1, NC_019740.1, NC_019738.1, NC_019739.1, and NC_019742.1. These accessions provide a genomic basis for further research into the genetic diversity and functional capabilities of Allocoleopsis franciscana. The presence of multiple replicons is often associated with certain ecological advantages, such as enhanced genetic stability and resilience under stress conditions. This trait could enable Allocoleopsis franciscana to thrive in fluctuating environments, which is particularly relevant for organisms living in diverse aquatic habitats. Understanding the genomic structure, particularly the role of these replicons, may shed light on the evolutionary strategies employed by this microalga for adaptation and survival. Such insights could be valuable for ecological studies and biotechnological applications involving this organism.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderColeofasciculales
FamilyColeofasciculaceae
GenusAllocoleopsis
SpeciesAllocoleopsis franciscana
StrainPCC 7113

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allocoleopsis franciscana PCC 7113 plasmid pMIC7113.07, complete

Gene Summary

Adenine Count

6928 bp

Thymine Count

6904 bp

Guanine Count

6156 bp

Cytosine Count

5994 bp

Genome Length

25982 bp

Protein-coding Genes

20 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease domain-containing proteinMIC7113_RS26865P30289Positive6543015 - 654342515262.4
barstar family proteinMIC7113_RS26870Not AvailablePositive6543430 - 654386716593.3
atp-grasp domain-containing proteinMIC7113_RS26875Not AvailablePositive6544698 - 654584042869.9
nudix domain-containing proteinMIC7113_RS26880P96590Positive6546146 - 654661317417.7
glycosyl hydrolase family 57MIC7113_RS26885Not AvailableNegative6546620 - 654812556881.3
cytochrome b/b6 domain-containing proteinMIC7113_RS26890Not AvailableNegative6548459 - 654905522771.6
tmem165/gdt1 family proteinMIC7113_RS26895P52876Negative6549130 - 654977122467.1
type i glyceraldehyde-3-phosphate dehydrogenaseMIC7113_RS26900Q9Z518Positive6550442 - 655144035954.0
pyruvate kinaseMIC7113_RS26905Q02499Positive6551917 - 655333851482.4
helix-turn-helix domain-containing proteinMIC7113_RS26910Not AvailableNegative6553451 - 65536638014.73

Displaying genes 5921 – 5930 of 6800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.