Allocoleopsis franciscana PCC 7113

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Coleofasciculales

Family

Coleofasciculaceae

Genus

Allocoleopsis

Description

Allocoleopsis franciscana PCC 7113 is characterized by possessing nine replicons. This multiplicity of replicons may suggest a complex genomic architecture that could contribute to its adaptability and survival in various environments. The organism has several accessions recorded, which include NC_019762.1, NC_019761.1, NC_019760.1, NC_019743.1, NC_019741.1, NC_019740.1, NC_019738.1, NC_019739.1, and NC_019742.1. These accessions provide a genomic basis for further research into the genetic diversity and functional capabilities of Allocoleopsis franciscana. The presence of multiple replicons is often associated with certain ecological advantages, such as enhanced genetic stability and resilience under stress conditions. This trait could enable Allocoleopsis franciscana to thrive in fluctuating environments, which is particularly relevant for organisms living in diverse aquatic habitats. Understanding the genomic structure, particularly the role of these replicons, may shed light on the evolutionary strategies employed by this microalga for adaptation and survival. Such insights could be valuable for ecological studies and biotechnological applications involving this organism.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderColeofasciculales
FamilyColeofasciculaceae
GenusAllocoleopsis
SpeciesAllocoleopsis franciscana
StrainPCC 7113

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allocoleopsis franciscana PCC 7113 plasmid pMIC7113.07, complete

Gene Summary

Adenine Count

6928 bp

Thymine Count

6904 bp

Guanine Count

6156 bp

Cytosine Count

5994 bp

Genome Length

25982 bp

Protein-coding Genes

20 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crp/fnr family transcriptional regulatorMIC7113_RS00815Not AvailableNegative191360 - 19206426058.6
gaf domain-containing proteinMIC7113_RS00820Not AvailableNegative192139 - 19323341244.5
mechanosensitive ion channel domain-containing proteinMIC7113_RS00825P77338Negative193293 - 19475054993.1
chase2 domain-containing proteinMIC7113_RS00830Not AvailableNegative195342 - 19757982536.2
duf928 domain-containing proteinMIC7113_RS00835Not AvailableNegative197834 - 19839720819.8
hypothetical proteinMIC7113_RS37135Not AvailablePositive198396 - 1985635517.64
tryptophan synthase subunit alphaMIC7113_RS00840B7JUK2Negative199182 - 19997928161.1
duf3007 family proteinMIC7113_RS00845Not AvailableNegative200063 - 20038311956.5
nad(p)h-quinone oxidoreductase subunit lMIC7113_RS00850Q31R74Negative200409 - 2006218302.57
Trna-leuNot AvailableNot AvailablePositive200859 - 200943Not Available

Displaying genes 521 – 530 of 6800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.