Allocoleopsis franciscana PCC 7113

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Coleofasciculales

Family

Coleofasciculaceae

Genus

Allocoleopsis

Description

Allocoleopsis franciscana PCC 7113 is characterized by possessing nine replicons. This multiplicity of replicons may suggest a complex genomic architecture that could contribute to its adaptability and survival in various environments. The organism has several accessions recorded, which include NC_019762.1, NC_019761.1, NC_019760.1, NC_019743.1, NC_019741.1, NC_019740.1, NC_019738.1, NC_019739.1, and NC_019742.1. These accessions provide a genomic basis for further research into the genetic diversity and functional capabilities of Allocoleopsis franciscana. The presence of multiple replicons is often associated with certain ecological advantages, such as enhanced genetic stability and resilience under stress conditions. This trait could enable Allocoleopsis franciscana to thrive in fluctuating environments, which is particularly relevant for organisms living in diverse aquatic habitats. Understanding the genomic structure, particularly the role of these replicons, may shed light on the evolutionary strategies employed by this microalga for adaptation and survival. Such insights could be valuable for ecological studies and biotechnological applications involving this organism.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderColeofasciculales
FamilyColeofasciculaceae
GenusAllocoleopsis
SpeciesAllocoleopsis franciscana
StrainPCC 7113

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

6928 bp

Thymine Count

6904 bp

Guanine Count

6156 bp

Cytosine Count

5994 bp

Genome Length

25982 bp

Protein-coding Genes

20 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine-type recombinase/integraseMIC7113_RS34135Not AvailableNegative14456 - 1699098018.2
duf3854 domain-containing proteinMIC7113_RS32690Not AvailableNegative17497 - 20457109539.0
plasmid partition protein pargMIC7113_RS32695Not AvailableNegative20688 - 208797199.53
hypothetical proteinMIC7113_RS32700Not AvailablePositive21143 - 2143611245.0
hypothetical proteinMIC7113_RS32705Not AvailablePositive21429 - 2173411821.1
hypothetical proteinMIC7113_RS35730Not AvailablePositive21907 - 2220611438.6
site-specific integraseMIC7113_RS32710Q72RY9Positive22368 - 2333034951.5
uma2 family endonucleaseMIC7113_RS32715Not AvailablePositive23421 - 2423030699.9
parb/repb/spo0j family partition proteinMIC7113_RS32720Q746H2Negative24284 - 2521935009.1
para family proteinMIC7113_RS32725P37522Negative25220 - 2597227472.0

Displaying genes 11 – 20 of 6800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.