Rhodococcus opacus RKJ300 = JCM 13270

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus RKJ300, also known as JCM 13270, is a Gram-positive bacterium characterized by its filamentous cell arrangement and cocci shape. This species is an aerobic organism, requiring oxygen for its metabolic processes. It is mesophilic, thriving in moderate temperature ranges suitable for biological activity. R. opacus RKJ300 is non-motile, lacking flagella, which indicates that it does not possess the means for active movement. It has a single replicon and one membrane, which is typical for many bacterial species. This organism is classified as free-living, suggesting it does not rely on a host for survival and can exist independently in various environments. The accession number for R. opacus RKJ300 is AJJH00000000.1, which is part of its genomic data repository, providing a reference for further research and characterization of this species. Ecologically, Rhodococcus species, including R. opacus, are known for their ability to degrade a wide range of organic pollutants, making them significant in bioremediation efforts. Their filamentous arrangement may enhance their capacity to colonize surfaces and access nutrients in various environments, showcasing their adaptability and potential utility in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
StrainRKJ300 = JCM 13270

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus RKJ300 = JCM 13270
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus opacus RKJ300 = JCM 13270 strain RKJ300 Contig175_1,

Gene Summary

Adenine Count

1348633 bp

Thymine Count

1349434 bp

Guanine Count

2775669 bp

Cytosine Count

2757512 bp

Genome Length

8231340 bp

Protein-coding Genes

7681 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6,7-dimethyl-8-ribityllumazine synthaseW59_02576Not AvailableNegative537960 - 53845116694.8
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii proteinW59_02581Not AvailableNegative538448 - 53971645767.3
riboflavin synthase subunit alphaW59_02586Not AvailableNegative539782 - 54039021299.3
riboflavin biosynthesis protein ribdW59_02591Not AvailableNegative540402 - 54145435981.6
ribulose-phosphate 3-epimeraseW59_02596Not AvailableNegative541484 - 54216723705.2
hypothetical proteinW59_02601Not AvailablePositive542226 - 54264215294.3
carveol dehydrogenaseW59_02606Not AvailableNegative542626 - 54348330147.9
ribosomal rna small subunit methyltransferaseW59_02611Not AvailableNegative543612 - 54490745409.5
methionyl-trna formyltransferaseW59_02616Not AvailableNegative545036 - 54595932457.9
hypothetical proteinW59_02621Not AvailablePositive546114 - 5462304107.84

Displaying genes 491 – 500 of 7734 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.