Rhodococcus opacus RKJ300 = JCM 13270

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus RKJ300, also known as JCM 13270, is a Gram-positive bacterium characterized by its filamentous cell arrangement and cocci shape. This species is an aerobic organism, requiring oxygen for its metabolic processes. It is mesophilic, thriving in moderate temperature ranges suitable for biological activity. R. opacus RKJ300 is non-motile, lacking flagella, which indicates that it does not possess the means for active movement. It has a single replicon and one membrane, which is typical for many bacterial species. This organism is classified as free-living, suggesting it does not rely on a host for survival and can exist independently in various environments. The accession number for R. opacus RKJ300 is AJJH00000000.1, which is part of its genomic data repository, providing a reference for further research and characterization of this species. Ecologically, Rhodococcus species, including R. opacus, are known for their ability to degrade a wide range of organic pollutants, making them significant in bioremediation efforts. Their filamentous arrangement may enhance their capacity to colonize surfaces and access nutrients in various environments, showcasing their adaptability and potential utility in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
StrainRKJ300 = JCM 13270

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus RKJ300 = JCM 13270
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus opacus RKJ300 = JCM 13270 strain RKJ300 Contig175_1,

Gene Summary

Adenine Count

1348633 bp

Thymine Count

1349434 bp

Guanine Count

2775669 bp

Cytosine Count

2757512 bp

Genome Length

8231340 bp

Protein-coding Genes

7681 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorW59_07589Not AvailableNegative1558880 - 155953023595.0
hypothetical proteinW59_07594Not AvailablePositive1559787 - 156063830669.0
short-chain alcohol dehydrogenaseW59_07599Not AvailablePositive1560683 - 156140825432.3
catechol 1,2-dioxygenaseW59_07604Not AvailablePositive1561423 - 156231933116.9
maleylacetate reductaseW59_07609Not AvailablePositive1562316 - 156339238098.6
hypothetical proteinW59_07614Not AvailablePositive1563442 - 156383114667.1
3-oxoacyl-[acyl-carrier-protein] reductaseW59_07619Not AvailablePositive1563862 - 156468928916.3
ribose abc transporter atp-binding proteinW59_07624Not AvailablePositive1564946 - 156649955241.5
ribose abc transporter permeaseW59_07629Not AvailablePositive1566492 - 156749033536.6
ribose abc transporter permeaseW59_07634Not AvailablePositive1567487 - 156850033503.9

Displaying genes 1471 – 1480 of 7734 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.