Rhodococcus opacus RKJ300 = JCM 13270

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus RKJ300, also known as JCM 13270, is a Gram-positive bacterium characterized by its filamentous cell arrangement and cocci shape. This species is an aerobic organism, requiring oxygen for its metabolic processes. It is mesophilic, thriving in moderate temperature ranges suitable for biological activity. R. opacus RKJ300 is non-motile, lacking flagella, which indicates that it does not possess the means for active movement. It has a single replicon and one membrane, which is typical for many bacterial species. This organism is classified as free-living, suggesting it does not rely on a host for survival and can exist independently in various environments. The accession number for R. opacus RKJ300 is AJJH00000000.1, which is part of its genomic data repository, providing a reference for further research and characterization of this species. Ecologically, Rhodococcus species, including R. opacus, are known for their ability to degrade a wide range of organic pollutants, making them significant in bioremediation efforts. Their filamentous arrangement may enhance their capacity to colonize surfaces and access nutrients in various environments, showcasing their adaptability and potential utility in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
StrainRKJ300 = JCM 13270

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus RKJ300 = JCM 13270
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus opacus RKJ300 = JCM 13270 strain RKJ300 Contig175_1,

Gene Summary

Adenine Count

1348633 bp

Thymine Count

1349434 bp

Guanine Count

2775669 bp

Cytosine Count

2757512 bp

Genome Length

8231340 bp

Protein-coding Genes

7681 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
major facilitator transporterW59_06970Not AvailablePositive1432344 - 143366946877.7
hypothetical proteinW59_06975Not AvailableNegative1433666 - 143424420049.1
haloalkane dehalogenaseW59_06980Not AvailableNegative1434322 - 143517330547.8
tetr family transcriptional regulatorW59_06985Not AvailableNegative1435200 - 143590726032.3
oxidoreductaseW59_06990Not AvailablePositive1436026 - 143713539863.3
fatty acid desaturaseW59_06995Not AvailablePositive1437169 - 143834144163.0
hypothetical proteinW59_07000Not AvailablePositive1438354 - 14385637650.92
glutamate dehydrogenaseW59_07005Not AvailableNegative1438619 - 143996248120.0
hypothetical proteinW59_07010Not AvailableNegative1440063 - 144056619150.0
short chain dehydrogenaseW59_07015Not AvailablePositive1440653 - 144136924654.3

Displaying genes 1351 – 1360 of 7734 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.