Rhodococcus opacus RKJ300 = JCM 13270

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus RKJ300 (also known as JCM 13270) is a Gram-positive, aerobic bacterium characterized by its coccoid shape and filamentous cell arrangement. This bacterium is notable for its ability to utilize various carbon sources, which may enable it to thrive in diverse environments. The filamentous arrangement of its cells suggests a potential for complex interactions within microbial communities, possibly enhancing its adaptability and survival in varied ecological niches. As an aerobic organism, R. opacus RKJ300 relies on oxygen for its metabolic processes, which may influence its distribution in environments where oxygen availability fluctuates. This trait could position it as a significant player in aerobic biogeochemical cycles, particularly in the degradation of organic compounds. The presence of filamentous growth may also indicate a potential for biofilm formation, which could have implications for its ecological roles, especially in soil and aquatic systems. Observations of such growth patterns can provide insights into the organism's interactions with other microorganisms and its contributions to nutrient cycling. Understanding the ecological niche of R. opacus RKJ300 can inform its potential applications in bioremediation and environmental management, particularly in the breakdown of pollutants due to its metabolic versatility.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
StrainRKJ300 = JCM 13270

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus RKJ300 = JCM 13270
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus opacus RKJ300 = JCM 13270


Gene Summary

Adenine Count

1348633 bp

Thymine Count

1349434 bp

Guanine Count

2775669 bp

Cytosine Count

2757512 bp

Genome Length

8231340 bp

Protein-coding Genes

7681 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transposaseW59_00005Not Available+1 - 1967403.81
5s ribosomal rnaNot AvailableNot Available+126 - 242Not Available
5s ribosomal rnaNot AvailableNot Available+135 - 251Not Available
hypothetical proteinW59_00010Not Available-320 - 5147144.62
para family chromosome partitioning atpaseW59_00015Not Available-588 - 144530949.9
parb family plasmid partitioning proteinW59_00020Not Available-1556 - 290848840.3
hypothetical proteinW59_00025Not Available-7258 - 74858217.99
hypothetical proteinW59_00030Not Available+7963 - 81767426.75
tetr family transcriptional regulatorW59_00035Not Available-8797 - 940221250.4
secreted dehydrogenaseW59_00040Not Available+9516 - 1028926298.1

Displaying genes 1 – 10 of 7734 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites