Flavobacterium sp. CF136

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. CF136 is a rod-shaped bacterium characterized by the presence of flagella, which enables motility. This organism possesses a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and cellular function. The genetic information for Flavobacterium sp. CF136 is cataloged under the accession number AKJZ00000000.1, providing a reference point for researchers interested in its genomic features. The presence of flagella indicates that Flavobacterium sp. CF136 is likely capable of movement in response to environmental stimuli, which is an important trait for survival and adaptation in diverse habitats. The motility conferred by flagella may allow this bacterium to access nutrients more effectively or evade unfavorable conditions. From a biological and ecological perspective, the traits of Flavobacterium sp. CF136 suggest that it may play a significant role in its ecosystem, possibly engaging in the decomposition of organic matter or contributing to nutrient cycling. As members of the Flavobacterium genus are often found in aquatic environments, the motility provided by flagella could enhance their ability to colonize various substrates or interact with other microorganisms, thereby influencing community dynamics and ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. CF136
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. CF136
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatPopulus deltoids rhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. CF136 PMI10_contig181.181, whole genome shotgun

Gene Summary

Adenine Count

1691935 bp

Thymine Count

1696169 bp

Guanine Count

857257 bp

Cytosine Count

856641 bp

Genome Length

5102016 bp

Protein-coding Genes

4319 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrate abc transporter, permease proteinPMI10_00122P73451Positive150433 - 15132032010.9
nitrate transport atp-binding subunits c and dPMI10_00123Q55463Positive151437 - 15224329834.8
hypothetical proteinPMI10_00124Not AvailablePositive152347 - 15290421533.5
methyltransferase family proteinPMI10_00125Not AvailableNegative153070 - 15369323553.6
abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentPMI10_00126P73450Negative153824 - 15521251875.0
hypothetical proteinPMI10_00127Not AvailableNegative155231 - 1553414245.45
nitrate/nitrite transporterPMI10_00128Not AvailableNegative155491 - 15696954233.6
response regulator containing a chey-like receiver domain and an hth dna-binding domainPMI10_00129Not AvailableNegative157072 - 15773124154.4
pas domain s-boxPMI10_00130P54663Negative157928 - 15973369360.0
hypothetical proteinPMI10_00131Not AvailableNegative159860 - 16044423080.5

Displaying genes 121 – 130 of 4371 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

183 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 183 metabolites

Health Effects

No health effects information available for this bacterium.