Rickettsia endosymbiont of Ixodes pacificus

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia endosymbiont of Ixodes pacificus is a notable bacterium characterized by the presence of flagella, which may play a role in its motility and interaction within its host. It is distinguished by having a single replicon, which suggests a streamlined genomic structure that can be beneficial for its survival and replication within the tick host. The genomic data for this endosymbiont can be accessed under the accession number LAOP00000000.1. Rickettsia species are known for their complex relationships with arthropod hosts, often influencing the biology of the host. In the case of Ixodes pacificus, the presence of Rickettsia endosymbiont may impact the ecology of the tick, potentially affecting its reproductive success or vector competence. The endosymbiont could provide benefits to the tick, such as nutritional supplementation or protection against pathogens. Understanding the role of Rickettsia in Ixodes pacificus is crucial, as it may have implications for the ecology of tick-borne diseases. The interactions between Rickettsia and its tick hosts could influence the dynamics of disease transmission, particularly in areas where Ixodes pacificus is prevalent. Thus, the study of this endosymbiont is significant for both microbiology and the broader ecological context of tick populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia endosymbiont of Ixodes pacificus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia endosymbiont of Ixodes pacificus


Gene Summary

Adenine Count

531004 bp

Thymine Count

529725 bp

Guanine Count

252360 bp

Cytosine Count

251637 bp

Genome Length

1564726 bp

Protein-coding Genes

1805 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
permease family proteinREIP_0001Not AvailableNegative249 - 4617652.48
permease family proteinREIP_0002Not AvailableNegative532 - 84010826.4
alanine racemase, c-terminal domain proteinREIP_0003Not AvailableNegative1300 - 164412542.0
alanine racemaseREIP_0004Not AvailableNegative1641 - 236326977.8
ribose-phosphate pyrophosphokinase domain proteinREIP_0005Not AvailableNegative2513 - 27679557.41
n-terminal domain of ribose phosphate pyrophosphokinase family proteinREIP_0006Not AvailableNegative2913 - 326013170.4
toluene tolerance, ttg2 family proteinREIP_0007Not AvailableNegative3355 - 395422317.9
vacj like lipofamily proteinREIP_0008Not AvailableNegative3974 - 472928314.1
tpr repeat family proteinREIP_0009Not AvailableNegative4734 - 573839475.4
degt/dnrj/eryc1/strs aminotransferase family proteinREIP_0010Not AvailablePositive6023 - 722544433.5

Displaying genes 1 – 10 of 1842 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.