Rickettsia endosymbiont of Ixodes pacificus

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia endosymbiont of Ixodes pacificus is a notable bacterium characterized by the presence of flagella, which may play a role in its motility and interaction within its host. It is distinguished by having a single replicon, which suggests a streamlined genomic structure that can be beneficial for its survival and replication within the tick host. The genomic data for this endosymbiont can be accessed under the accession number LAOP00000000.1. Rickettsia species are known for their complex relationships with arthropod hosts, often influencing the biology of the host. In the case of Ixodes pacificus, the presence of Rickettsia endosymbiont may impact the ecology of the tick, potentially affecting its reproductive success or vector competence. The endosymbiont could provide benefits to the tick, such as nutritional supplementation or protection against pathogens. Understanding the role of Rickettsia in Ixodes pacificus is crucial, as it may have implications for the ecology of tick-borne diseases. The interactions between Rickettsia and its tick hosts could influence the dynamics of disease transmission, particularly in areas where Ixodes pacificus is prevalent. Thus, the study of this endosymbiont is significant for both microbiology and the broader ecological context of tick populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia endosymbiont of Ixodes pacificus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ixodes pacificus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia endosymbiont of Ixodes pacificus


Gene Summary

Adenine Count

531004 bp

Thymine Count

529725 bp

Guanine Count

252360 bp

Cytosine Count

251637 bp

Genome Length

1564726 bp

Protein-coding Genes

1805 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobq/cobb/mind/para nucleotide binding domain proteinREIP_0061Not AvailableNegative53177 - 5394428545.1
rrna small subunit methyltransferase g family proteinREIP_0062Not AvailableNegative53941 - 541688884.97
16s rrna (guanine(527)-n(7))-methyltransferase gidbREIP_0063Not AvailableNegative54129 - 5451514593.0
trna uridine 5-carboxymethylaminomethyl modification enzyme gidaREIP_0064Not AvailableNegative54499 - 5636768829.7
nucleoside diphosphate kinase family proteinREIP_0065Not AvailableNegative56371 - 5679315748.8
major facilitator superfamily proteinREIP_0066Not AvailableNegative56821 - 5811047465.9
adp,atp carrier protein 1REIP_0067Not AvailableNegative58187 - 5968356681.8
polypeptide deformylase family proteinREIP_0068Not AvailablePositive59881 - 6021012241.0
polypeptide deformylase family proteinREIP_0069Not AvailablePositive60232 - 6055512397.9
hypothetical proteinREIP_0070Not AvailableNegative60746 - 609587466.85

Displaying genes 61 – 70 of 1842 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.