Rickettsia endosymbiont of Ixodes pacificus

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia endosymbiont of Ixodes pacificus is a notable bacterium characterized by the presence of flagella, which may play a role in its motility and interaction within its host. It is distinguished by having a single replicon, which suggests a streamlined genomic structure that can be beneficial for its survival and replication within the tick host. The genomic data for this endosymbiont can be accessed under the accession number LAOP00000000.1. Rickettsia species are known for their complex relationships with arthropod hosts, often influencing the biology of the host. In the case of Ixodes pacificus, the presence of Rickettsia endosymbiont may impact the ecology of the tick, potentially affecting its reproductive success or vector competence. The endosymbiont could provide benefits to the tick, such as nutritional supplementation or protection against pathogens. Understanding the role of Rickettsia in Ixodes pacificus is crucial, as it may have implications for the ecology of tick-borne diseases. The interactions between Rickettsia and its tick hosts could influence the dynamics of disease transmission, particularly in areas where Ixodes pacificus is prevalent. Thus, the study of this endosymbiont is significant for both microbiology and the broader ecological context of tick populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia endosymbiont of Ixodes pacificus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ixodes pacificus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia endosymbiont of Ixodes pacificus strain Humboldt

Gene Summary

Adenine Count

531004 bp

Thymine Count

529725 bp

Guanine Count

252360 bp

Cytosine Count

251637 bp

Genome Length

1564726 bp

Protein-coding Genes

1805 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hepn domain proteinREIP_0310Not AvailablePositive242296 - 2425389742.02
hypothetical proteinREIP_0311Not AvailableNegative242851 - 2430577707.23
aaa domain proteinREIP_0312Not AvailableNegative243090 - 24397133582.1
pp_00306REIP_0313Not AvailablePositive244280 - 245578Not Available
penicillin-binding, 1a family proteinREIP_0314Not AvailablePositive245582 - 24795489060.2
beta-lactamase class d domain proteinREIP_0315Not AvailablePositive248195 - 2483264956.22
dde superendonuclease family proteinREIP_0316Not AvailableNegative248333 - 24867113032.0
transposase family proteinREIP_0317Not AvailableNegative248826 - 24920014588.7
nadh-quinone oxidoreductase, chain i family proteinREIP_0318Not AvailableNegative249824 - 25025516540.7
nadh-ubiquinone oxidoreductase chain 1REIP_0319Not AvailableNegative250448 - 25146738069.0

Displaying genes 311 – 320 of 1842 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.