Rickettsia endosymbiont of Ixodes pacificus

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia endosymbiont of Ixodes pacificus is a notable bacterium characterized by the presence of flagella, which may play a role in its motility and interaction within its host. It is distinguished by having a single replicon, which suggests a streamlined genomic structure that can be beneficial for its survival and replication within the tick host. The genomic data for this endosymbiont can be accessed under the accession number LAOP00000000.1. Rickettsia species are known for their complex relationships with arthropod hosts, often influencing the biology of the host. In the case of Ixodes pacificus, the presence of Rickettsia endosymbiont may impact the ecology of the tick, potentially affecting its reproductive success or vector competence. The endosymbiont could provide benefits to the tick, such as nutritional supplementation or protection against pathogens. Understanding the role of Rickettsia in Ixodes pacificus is crucial, as it may have implications for the ecology of tick-borne diseases. The interactions between Rickettsia and its tick hosts could influence the dynamics of disease transmission, particularly in areas where Ixodes pacificus is prevalent. Thus, the study of this endosymbiont is significant for both microbiology and the broader ecological context of tick populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia endosymbiont of Ixodes pacificus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ixodes pacificus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia endosymbiont of Ixodes pacificus strain Humboldt

Gene Summary

Adenine Count

531004 bp

Thymine Count

529725 bp

Guanine Count

252360 bp

Cytosine Count

251637 bp

Genome Length

1564726 bp

Protein-coding Genes

1805 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramyl-tripeptide synthetase family proteinREIP_1161Not AvailablePositive996195 - 99778158822.4
giy-yig catalytic domain proteinREIP_1162Not AvailablePositive997879 - 99813010121.4
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase family proteinREIP_1163Not AvailablePositive998214 - 99971656041.5
phospho-n-acetylmuramoyl-pentapeptide- transferaseREIP_1164Not AvailablePositive999923 - 100100839760.4
arp2/3 complex-activating protein rickaREIP_1165Not AvailablePositive1001231 - 100276058198.2
transposase, mutator family proteinREIP_1166Not AvailablePositive1003600 - 100427425843.5
putative tryptophan repressor binding -like proteinREIP_1167Not AvailableNegative1004321 - 10045488422.12
flavodoxin family proteinREIP_1168Not AvailableNegative1004700 - 10048916911.17
coenzyme a transferase family proteinREIP_1169Not AvailableNegative1005075 - 10052696954.79
coenzyme a transferase family proteinREIP_1170Not AvailableNegative1005266 - 10055239188.96

Displaying genes 1161 – 1170 of 1842 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.