Thalassospira xiamenensis M-5 = DSM 17429

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira xiamenensis M-5, classified as DSM 17429, is a Gram-negative bacterium characterized by its rod shape. This organism is notable for having two replicons, which suggests a complex genomic organization that could be linked to its adaptability and survival in various environments. The taxonomic classification of Thalassospira xiamenensis is supported by its genetic material, with accessions NZ_CP004389.1 and NZ_CP004388.1 providing essential genomic data for further study. These accessions indicate that the organism has been sequenced, contributing to our understanding of its genetic makeup and potential functional capabilities. Understanding the traits of Thalassospira xiamenensis M-5 is critical for appreciating its role in marine ecosystems. As a member of the Thalassospira genus, this bacterium may play a significant role in nutrient cycling or interactions within its marine habitat. Its Gram-negative status and rod shape may also suggest specific mechanisms of environmental interaction, including biofilm formation or responses to changes in salinity and temperature. The presence of two replicons might further enhance its flexibility in responding to ecological pressures, potentially allowing it to thrive in diverse marine conditions. Thus, the traits of Thalassospira xiamenensis M-5 provide insights into its ecological significance and adaptability in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira xiamenensis
StrainM-5 = DSM 17429

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid

Gene Summary

Adenine Count

50269 bp

Thymine Count

45867 bp

Guanine Count

47545 bp

Cytosine Count

48699 bp

Genome Length

192380 bp

Protein-coding Genes

192 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent transcriptional regulatorTH3_RS18440Q9ZIB7Positive3995007 - 399661758598.9
3-hydroxybutyrate dehydrogenaseTH3_RS18450Q9X6U2Positive3996962 - 399774727431.8
helix-turn-helix domain-containing proteinTH3_RS22510Not AvailablePositive3997864 - 39981309702.7
type ii toxin-antitoxin system hipa family toxinTH3_RS18460P55564Positive3998130 - 399944048768.3
lysr substrate-binding domain-containing proteinTH3_RS18465P43011Negative3999502 - 400037732541.1
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseTH3_RS18470P73138Positive4000494 - 400160339333.5
s-formylglutathione hydrolaseTH3_RS18475B1X7P2Positive4001677 - 400253431647.2
energy-coupling factor transporter transmembrane protein ecftTH3_RS18480Q2KBP6Negative4002623 - 400322521815.3
energy-coupling factor abc transporter atp-binding proteinTH3_RS18485Q7N0N3Negative4003222 - 400389625131.4
biotin transporter bioyTH3_RS18490Q2KBP7Negative4003971 - 400451918744.8

Displaying genes 3861 – 3870 of 4413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0005202(S)-4-hydroxy-2-oxopentanoateC5H7O4Chemical structure of (S)-4-hydroxy-2-oxopentanoateNot available
Average131.108Da
Monoisotopic131.034982285Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.