Thalassospira xiamenensis M-5 = DSM 17429

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira xiamenensis M-5, classified as DSM 17429, is a Gram-negative bacterium characterized by its rod shape. This organism is notable for having two replicons, which suggests a complex genomic organization that could be linked to its adaptability and survival in various environments. The taxonomic classification of Thalassospira xiamenensis is supported by its genetic material, with accessions NZ_CP004389.1 and NZ_CP004388.1 providing essential genomic data for further study. These accessions indicate that the organism has been sequenced, contributing to our understanding of its genetic makeup and potential functional capabilities. Understanding the traits of Thalassospira xiamenensis M-5 is critical for appreciating its role in marine ecosystems. As a member of the Thalassospira genus, this bacterium may play a significant role in nutrient cycling or interactions within its marine habitat. Its Gram-negative status and rod shape may also suggest specific mechanisms of environmental interaction, including biofilm formation or responses to changes in salinity and temperature. The presence of two replicons might further enhance its flexibility in responding to ecological pressures, potentially allowing it to thrive in diverse marine conditions. Thus, the traits of Thalassospira xiamenensis M-5 provide insights into its ecological significance and adaptability in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira xiamenensis
StrainM-5 = DSM 17429

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid

Gene Summary

Adenine Count

50269 bp

Thymine Count

45867 bp

Guanine Count

47545 bp

Cytosine Count

48699 bp

Genome Length

192380 bp

Protein-coding Genes

192 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s6TH3_RS12470Q135M8Positive2649436 - 264981314466.1
30s ribosomal protein s18TH3_RS12475B0SWL0Positive2649836 - 26500698867.03
duf2232 domain-containing proteinTH3_RS12480Not AvailablePositive2650117 - 265105533510.4
50s ribosomal protein l9TH3_RS12485A4WS83Positive2651055 - 265166021780.7
replicative dna helicaseTH3_RS12490Q4UL62Positive2651848 - 265338656937.2
alanine racemaseTH3_RS12495A5G2H9Positive2653430 - 265455141083.5
abc transporter permeaseTH3_RS12500Q1RGU3Positive2654611 - 265538427551.5
abc transporter atp-binding proteinTH3_RS12505Q9AT00Positive2655394 - 265617027460.3
dna repair protein radaTH3_RS12510Q2YMH5Positive2656224 - 265763649826.2
cvpa family proteinTH3_RS12515Not AvailablePositive2657699 - 265838524934.2

Displaying genes 2671 – 2680 of 4413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0005202(S)-4-hydroxy-2-oxopentanoateC5H7O4Chemical structure of (S)-4-hydroxy-2-oxopentanoateNot available
Average131.108Da
Monoisotopic131.034982285Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.