Kingdom
Methanobacteriati
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Thermoplasmatales
Family
Picrophilaceae
Genus
Picrophilus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Thermoplasmatota |
| Class | Thermoplasmata |
| Order | Thermoplasmatales |
| Family | Picrophilaceae |
| Genus | Picrophilus |
| Species | Picrophilus oshimae |
| Strain | DSM 9789 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
494440 bp
Thymine Count
495390 bp
Guanine Count
275829 bp
Cytosine Count
280236 bp
Genome Length
1545895 bp
Protein-coding Genes
1585 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas2 | PTO_RS00005 | Not Available | Negative | 524 - 787 | 10275.7 |
| type i-b crispr-associated endonuclease cas1b | PTO_RS00010 | Not Available | Negative | 792 - 1748 | 37376.0 |
| crispr-associated protein cas4 | PTO_RS00015 | Not Available | Negative | 1751 - 2260 | 20132.4 |
| type i-d crispr-associated helicase cas3' | PTO_RS00020 | Not Available | Negative | 2270 - 4009 | 67747.5 |
| type i-d crispr-associated protein cas5/csc1 | PTO_RS00025 | Not Available | Negative | 3990 - 4649 | 25167.6 |
| type i-d crispr-associated protein cas7/csc2 | PTO_RS00030 | Not Available | Negative | 4669 - 5601 | 35384.0 |
| hypothetical protein | PTO_RS00035 | Not Available | Negative | 5603 - 8161 | 98703.9 |
| crispr-associated endoribonuclease cas6 | PTO_RS00040 | Not Available | Negative | 8158 - 8859 | 27283.0 |
| hypothetical protein | PTO_RS00045 | Not Available | Positive | 8898 - 9590 | 26545.5 |
| badf/badg/bcra/bcrd atpase family protein | PTO_RS00050 | Not Available | Negative | 9705 - 10694 | 36367.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.