Kingdom
Methanobacteriati
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Thermoplasmatales
Family
Picrophilaceae
Genus
Picrophilus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Thermoplasmatota |
| Class | Thermoplasmata |
| Order | Thermoplasmatales |
| Family | Picrophilaceae |
| Genus | Picrophilus |
| Species | Picrophilus oshimae |
| Strain | DSM 9789 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
494440 bp
Thymine Count
495390 bp
Guanine Count
275829 bp
Cytosine Count
280236 bp
Genome Length
1545895 bp
Protein-coding Genes
1585 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii domain-containing protein | PTO_RS03130 | Not Available | Negative | 623256 - 623903 | 25029.3 |
| threonine--trna ligase | PTO_RS03135 | Not Available | Negative | 623904 - 625898 | 77325.5 |
| dsre family protein | PTO_RS03140 | Not Available | Positive | 625939 - 626268 | 12331.1 |
| winged helix-turn-helix domain-containing protein | PTO_RS03145 | Not Available | Negative | 626259 - 626684 | 16833.1 |
| type i 3-dehydroquinate dehydratase | PTO_RS03150 | Not Available | Positive | 626741 - 627352 | 24399.3 |
| marc family protein | PTO_RS03155 | Not Available | Negative | 627333 - 627962 | 22646.8 |
| glycoside hydrolase family 15 protein | PTO_RS03160 | Not Available | Negative | 627998 - 629839 | 71551.4 |
| 3-dehydroquinate synthase family protein | PTO_RS03165 | Not Available | Positive | 629932 - 630948 | 37758.1 |
| shikimate dehydrogenase | PTO_RS03170 | Not Available | Positive | 630945 - 631745 | 29879.9 |
| shikimate kinase | PTO_RS03175 | Not Available | Positive | 631738 - 632577 | 31141.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
