Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter glucosidilyticus |
| Strain | DD6b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1264363 bp
Thymine Count
1263493 bp
Guanine Count
676298 bp
Cytosine Count
668224 bp
Genome Length
3872381 bp
Protein-coding Genes
3305 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 89): tataaaaggcgaaaataa | Not Available | Not Available | Positive | 579665 - 580060 | Not Available |
| aspartate aminotransferase | PBAC_04930 | Not Available | Negative | 580121 - 581353 | 45872.0 |
| hypothetical protein | PBAC_04940 | Not Available | Negative | 581469 - 581861 | 13978.1 |
| pyruvate dehydrogenase e1 component subunit beta | PBAC_04950 | Not Available | Positive | 581988 - 584414 | 90498.1 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | PBAC_04960 | Not Available | Negative | 584418 - 585332 | 34047.3 |
| abc-2 family transporter protein | PBAC_04970 | Not Available | Negative | 585370 - 586686 | 48941.4 |
| putative abc transporter atp-binding protein yxlf | PBAC_04980 | Not Available | Negative | 586693 - 587595 | 34392.8 |
| soluble aldose sugar dehydrogenase ylii | PBAC_04990 | Not Available | Negative | 587608 - 589047 | 53424.9 |
| hypothetical protein | PBAC_05000 | Not Available | Negative | 589261 - 589677 | 15125.2 |
| helix-turn-helix domain protein | PBAC_05010 | Not Available | Positive | 589772 - 590014 | 9052.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
