Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter glucosidilyticus |
| Strain | DD6b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1264363 bp
Thymine Count
1263493 bp
Guanine Count
676298 bp
Cytosine Count
668224 bp
Genome Length
3872381 bp
Protein-coding Genes
3305 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine--trna ligase | PBAC_23620 | Not Available | Negative | 2762918 - 2764690 | 66731.6 |
| murein dd-endopeptidase mepm | PBAC_23630 | Not Available | Positive | 2764836 - 2765804 | 36613.1 |
| hth-type transcriptional repressor ycge | PBAC_23640 | Not Available | Positive | 2765836 - 2766171 | 13192.1 |
| lipid kinase yegs | PBAC_23650 | Not Available | Positive | 2766217 - 2767116 | 33332.0 |
| calcineurin-like phosphoesterase | PBAC_23660 | Not Available | Negative | 2767090 - 2768136 | 39975.5 |
| hypothetical protein | PBAC_23670 | Not Available | Positive | 2768218 - 2769018 | 29396.0 |
| hypothetical protein | PBAC_23680 | Not Available | Positive | 2769008 - 2771071 | 78964.3 |
| comec family competence protein | PBAC_23690 | Not Available | Positive | 2771188 - 2773200 | 77101.1 |
| hypothetical protein | PBAC_23700 | Not Available | Positive | 2773287 - 2773958 | 25285.8 |
| lipoteichoic acid synthase 2 | PBAC_23710 | Not Available | Positive | 2774087 - 2775889 | 67940.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
