Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter glucosidilyticus |
| Strain | DD6b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1264363 bp
Thymine Count
1263493 bp
Guanine Count
676298 bp
Cytosine Count
668224 bp
Genome Length
3872381 bp
Protein-coding Genes
3305 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytochrome-like protein cph1 | PBAC_20620 | Not Available | Negative | 2436276 - 2437400 | 42865.3 |
| hypothetical protein | PBAC_20630 | Not Available | Positive | 2437591 - 2438025 | 16232.3 |
| iron(ii)-dependent oxidoreductase egtb | PBAC_20640 | Not Available | Positive | 2438136 - 2439287 | 45432.4 |
| histidine-specific methyltransferase egtd | PBAC_20650 | Not Available | Positive | 2439295 - 2440233 | 35905.2 |
| blue-light-activated protein | PBAC_20660 | Not Available | Positive | 2440453 - 2442453 | 78127.2 |
| diaminopimelate epimerase | PBAC_20670 | Not Available | Negative | 2442450 - 2443244 | 29654.2 |
| putative periplasmic serine endoprotease degp-like protein | PBAC_20680 | Not Available | Positive | 2443428 - 2444969 | 54382.9 |
| metallophosphoesterase, dna ligase-associated | PBAC_20690 | Not Available | Positive | 2445039 - 2445686 | 24650.2 |
| succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family | PBAC_20700 | Not Available | Positive | 2445918 - 2446685 | 29029.7 |
| fumarate reductase flavoprotein subunit | PBAC_20710 | Not Available | Positive | 2446733 - 2448667 | 71627.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
