Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter glucosidilyticus |
| Strain | DD6b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1264363 bp
Thymine Count
1263493 bp
Guanine Count
676298 bp
Cytosine Count
668224 bp
Genome Length
3872381 bp
Protein-coding Genes
3305 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PBAC_20320 | Not Available | Negative | 2403097 - 2403327 | 8343.34 |
| aspartate--trna ligase | PBAC_20330 | Not Available | Positive | 2403485 - 2405260 | 67098.3 |
| tonb-dependent siderophore receptor | PBAC_20340 | Not Available | Negative | 2405327 - 2407774 | 91856.7 |
| protease 3 | PBAC_20350 | Not Available | Positive | 2408113 - 2410956 | 106062.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PBAC_20360 | Not Available | Negative | 2411102 - 2412400 | 47890.7 |
| secreted effector protein pipb2 | PBAC_20370 | Not Available | Positive | 2412473 - 2413042 | 21689.8 |
| 6-phosphogluconolactonase | PBAC_20380 | Not Available | Negative | 2413200 - 2413919 | 26441.5 |
| glucose-6-phosphate 1-dehydrogenase | PBAC_20390 | Not Available | Negative | 2413919 - 2415445 | 58418.7 |
| polyphosphate glucokinase | PBAC_20400 | Not Available | Negative | 2415494 - 2416225 | 26600.4 |
| indole-3-glycerol phosphate synthase | PBAC_20410 | Not Available | Negative | 2416361 - 2417143 | 28755.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
