Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter glucosidilyticus |
| Strain | DD6b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1264363 bp
Thymine Count
1263493 bp
Guanine Count
676298 bp
Cytosine Count
668224 bp
Genome Length
3872381 bp
Protein-coding Genes
3305 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine dehydrogenase (decarboxylating) | PBAC_19920 | Not Available | Positive | 2358215 - 2361100 | 105583.0 |
| phytochrome-like protein cph1 | PBAC_19930 | Not Available | Positive | 2361237 - 2363450 | 83639.1 |
| hypothetical protein | PBAC_19940 | Not Available | Positive | 2363535 - 2364122 | 20896.5 |
| two component system sensor kinase ssra | PBAC_19950 | Not Available | Positive | 2364494 - 2364904 | 15594.9 |
| putative quorum-quenching lactonase ytnp | PBAC_19960 | Not Available | Negative | 2364897 - 2365673 | 29432.6 |
| single-stranded-dna-specific exonuclease recj | PBAC_19970 | Not Available | Positive | 2365781 - 2367481 | 63750.6 |
| lipopolysaccharide export system atp-binding protein lptb | PBAC_19980 | Not Available | Positive | 2367492 - 2368232 | 27789.8 |
| gh3 auxin-responsive promoter | PBAC_19990 | Not Available | Positive | 2368272 - 2369789 | 58706.2 |
| ecf rna polymerase sigma factor sige | PBAC_20000 | Not Available | Positive | 2369858 - 2370430 | 21942.5 |
| hypothetical protein | PBAC_20010 | Not Available | Positive | 2370411 - 2371160 | 28175.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
