Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter psychrotolerans |
| Strain | DSM 18569 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
938137 bp
Thymine Count
932050 bp
Guanine Count
1447205 bp
Cytosine Count
1450355 bp
Genome Length
4767747 bp
Protein-coding Genes
4218 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN02746009_04041 | Not Available | Negative | 4516712 - 4517854 | 42372.5 |
| hypothetical protein | SAMN02746009_04042 | Not Available | Negative | 4517868 - 4518713 | 29252.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02746009_04043 | Not Available | Negative | 4518694 - 4519275 | 21467.7 |
| chat domain-containing protein | SAMN02746009_04044 | Not Available | Negative | 4519564 - 4520640 | 39564.1 |
| integrase core domain-containing protein | SAMN02746009_04045 | Not Available | Negative | 4520741 - 4521082 | 13119.7 |
| integrase core domain-containing protein | SAMN02746009_04046 | Not Available | Positive | 4521109 - 4521627 | 20144.1 |
| aspartate ammonia-lyase | SAMN02746009_04047 | Not Available | Negative | 4521748 - 4523154 | 51110.5 |
| s-adenosylmethionine decarboxylase | SAMN02746009_04048 | Not Available | Positive | 4523374 - 4523727 | 12662.9 |
| protein of unknown function | SAMN02746009_04049 | Not Available | Positive | 4523724 - 4525058 | 49851.1 |
| hypothetical protein | SAMN02746009_04050 | Not Available | Positive | 4525079 - 4525261 | 6688.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
