Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter psychrotolerans |
| Strain | DSM 18569 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
938137 bp
Thymine Count
932050 bp
Guanine Count
1447205 bp
Cytosine Count
1450355 bp
Genome Length
4767747 bp
Protein-coding Genes
4218 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylglutaconyl-coa hydratase | SAMN02746009_03681 | Not Available | Positive | 4109607 - 4110419 | 29724.9 |
| beta-carotene 3-hydroxylase | SAMN02746009_03682 | Not Available | Positive | 4110577 - 4111095 | 20143.5 |
| merr hth family regulatory protein | SAMN02746009_03683 | Not Available | Positive | 4111161 - 4112003 | 31533.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02746009_03684 | Not Available | Positive | 4112301 - 4112816 | 19688.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN02746009_03685 | Not Available | Negative | 4112966 - 4114618 | 57090.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN02746009_03686 | Not Available | Negative | 4114647 - 4116647 | 67642.6 |
| transposase | SAMN02746009_03687 | Not Available | Positive | 4117505 - 4117791 | 11354.7 |
| predicted transposase ybfd/ydcc associated with h repeats | SAMN02746009_03688 | Not Available | Positive | 4117792 - 4118250 | 17631.1 |
| transposase and inactivated derivatives | SAMN02746009_03689 | Not Available | Positive | 4118258 - 4118542 | 10720.0 |
| putative transposase | SAMN02746009_03690 | Not Available | Positive | 4118539 - 4119411 | 33001.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
