Hymenobacter daecheongensis DSM 21074

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter daecheongensis DSM 21074 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This species exhibits psychrotolerant properties, with an optimal growth temperature of 16°C, allowing it to thrive in cooler environments. It is notable for having a single replicon and does not form spores, which is a common trait among many bacteria that thrive in stable environments. The ability of Hymenobacter daecheongensis to grow at low temperatures suggests potential ecological roles in cold habitats, such as polar regions or high-altitude ecosystems. This psychrotolerant characteristic may enable it to participate in nutrient cycling and contribute to the microbial community dynamics in such environments. The absence of motility and sporulation indicates that it relies on environmental stability for survival and growth, potentially limiting its distribution to specific niches where conditions remain favorable. Overall, the traits of Hymenobacter daecheongensis DSM 21074 highlight its adaptation to cold, stable environments, which may be significant in understanding microbial life in extreme habitats. Further studies could elucidate its ecological role and potential applications in biotechnology, particularly in processes that require functioning at low temperatures.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter daecheongensis
StrainDSM 21074

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter daecheongensis DSM 21074 genome assembly, contig:

Gene Summary

Adenine Count

847863 bp

Thymine Count

853555 bp

Guanine Count

1339294 bp

Cytosine Count

1345034 bp

Genome Length

4385746 bp

Protein-coding Genes

3643 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkylhydroperoxidase ahpd family core domain-containing proteinSAMN02745146_0794Not AvailableNegative483631 - 48400814459.4
comf family proteinSAMN02745146_0795Not AvailablePositive484231 - 48493226016.5
gliding motility-associated lipoprotein gldj/gliding motility-associated lipoprotein gldj,tigr03530SAMN02745146_0796Not AvailableNegative485123 - 48638246857.4
type ix secretion system membrane protein, porp/sprf familySAMN02745146_0797Not AvailableNegative486451 - 48752438637.0
por secretion system c-terminal sorting domain-containing proteinSAMN02745146_0798Not AvailableNegative488025 - 491501120935.0
asma family proteinSAMN02745146_0799Not AvailablePositive492102 - 495185111902.0
predicted component of the type vi protein secretion systemSAMN02745146_0800Not AvailablePositive495297 - 49613330180.9
thiol-disulfide isomerase or thioredoxinSAMN02745146_0801Not AvailableNegative496326 - 49694622798.4
uncharacterized damage-inducible protein dinb (forms a four-helix bundle)SAMN02745146_0802Not AvailableNegative497053 - 49755018497.9
hypothetical proteinSAMN02745146_0803Not AvailableNegative497661 - 49812816874.9

Displaying genes 441 – 450 of 3704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.