Litchfieldella anticariensis FP35 = DSM 16096

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Litchfieldella

Description

Litchfieldella anticariensis FP35, also designated as DSM 16096, is a bacterial strain characterized by having a single replicon. This trait is significant as it typically indicates a streamlined genomic organization, which can influence the organism’s adaptability and replication efficiency in various environments. The genomic information for Litchfieldella anticariensis is available under the accession number ASTJ00000000.1. While the specific ecological or physiological roles of this bacterium are not detailed in the provided data, the presence of a single replicon suggests that it may possess a relatively simple and efficient method of genetic regulation and stability. Understanding the genomic structure and replicon number of Litchfieldella anticariensis could provide insights into its evolutionary adaptations and ecological interactions. For instance, bacteria with single replicons often demonstrate rapid growth rates and can thrive in competitive environments, which may be relevant for their survival in both natural and artificial habitats. In summary, Litchfieldella anticariensis FP35 (DSM 16096) is a bacterium with a single replicon, and the genomic data available may serve as a foundation for further studies into its ecological roles and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusLitchfieldella
SpeciesLitchfieldella anticariensis
StrainFP35 = DSM 16096

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Litchfieldella anticariensis FP35 = DSM 16096


Gene Summary

Adenine Count

1055271 bp

Thymine Count

1045761 bp

Guanine Count

1474500 bp

Cytosine Count

1492113 bp

Genome Length

5067645 bp

Protein-coding Genes

4674 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Nicotinate phosphoribosyltransferaseL861_08830Not AvailablePositive2051868 - 205307045519.7
Addiction module antitoxin/toxinL861_08835Not AvailableNegative2053332 - 205361310040.0
Addiction module antitoxin/toxinL861_08840Not AvailableNegative2053622 - 20537625196.33
AttlNot AvailableNot AvailablePositive2054108 - 2054173Not Available
hypothetical proteinL861_08845Not AvailablePositive2054703 - 20548735818.82
Portal proteinL861_08850Not AvailableNegative2055276 - 205634339980.5
Terminase large subunitL861_08855Not AvailableNegative2056340 - 205815468902.4
Putative capsid scaffolding proteinL861_08860Not AvailablePositive2058270 - 205908829694.7
Major capsid protein, p2 familyL861_08865Not AvailablePositive2059104 - 206012037657.6
Gp1, phage terminase, endonuclease subunitL861_08870Not AvailablePositive2060133 - 206083125652.6

Displaying genes 1 – 10 of 4789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

6 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0003702L-methionine (R)-S-oxideC5H11NO3SChemical structure of L-methionine (R)-S-oxideNot available
Average165.211Da
Monoisotopic165.045963913Da

Displaying 1–6 of 6 metabolites

Health Effects

No health effects information available for this bacterium.