Citrobacter werkmanii NBRC 105721

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter werkmanii NBRC 105721 is a gram-negative, rod-shaped bacterium recognized for its chemoheterotrophic metabolism, utilizing organic compounds as its primary energy source. This species is motile, possessing flagella that facilitate its movement in various environments. C. werkmanii is classified as mesophilic, indicating that it thrives in moderate temperature ranges, which are typically conducive to microbial growth and activity. The organism has a single replicon, suggesting a streamlined genomic organization that may influence its adaptability and replication. Notably, C. werkmanii does not undergo sporulation, which is a reproductive strategy that allows some bacteria to survive unfavorable conditions. The lack of sporulation in this species could indicate a reliance on stable environments or specific ecological niches where it can effectively compete for resources. The accession number for this strain is BBMW00000000.1, providing a reference for genomic and taxonomic studies. Understanding the traits of C. werkmanii can provide insights into its ecological roles, particularly in nutrient cycling within its habitat. Its ability to thrive in mesophilic conditions and its chemoheterotrophic nature suggest that it may play a significant role in the decomposition of organic material, contributing to soil health and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter werkmanii
StrainNBRC 105721

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter werkmanii NBRC 105721
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Citrobacter werkmanii NBRC 105721 DNA, contig: CIWKM30, whole

Gene Summary

Adenine Count

1191229 bp

Thymine Count

1180129 bp

Guanine Count

1276258 bp

Cytosine Count

1300381 bp

Genome Length

4947997 bp

Protein-coding Genes

4499 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative peptidase m23 family proteinCIWKM_11_02110Not AvailableNegative2873865 - 287464127197.7
isopentenyl-diphosphate delta-isomeraseCIWKM_11_02120Not AvailablePositive2874790 - 287533820262.9
lysyl-trna synthetaseCIWKM_11_02130Not AvailableNegative2875424 - 287694157644.7
peptide chain release factor 2CIWKM_11_02140Not AvailableNegative2876951 - 287783232823.3
single-stranded-dna-specific exonucleaseCIWKM_11_02150Not AvailableNegative2878141 - 287987463251.6
thiol--disulfide interchange protein dsbcCIWKM_11_02160Not AvailableNegative2879880 - 288059325966.4
tyrosine recombinase xerdCIWKM_11_02170Not AvailableNegative2880617 - 288151334212.2
flavodoxin iiCIWKM_11_02180Not AvailablePositive2881626 - 288214719745.3
hypothetical protein ygfxCIWKM_11_02190Not AvailableNegative2882247 - 288265415977.8
hypothetical protein ygfyCIWKM_11_02200Not AvailableNegative2882635 - 288290110557.7

Displaying genes 2731 – 2740 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.