Citrobacter werkmanii NBRC 105721

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter werkmanii NBRC 105721 is a gram-negative, rod-shaped bacterium recognized for its chemoheterotrophic metabolism, utilizing organic compounds as its primary energy source. This species is motile, possessing flagella that facilitate its movement in various environments. C. werkmanii is classified as mesophilic, indicating that it thrives in moderate temperature ranges, which are typically conducive to microbial growth and activity. The organism has a single replicon, suggesting a streamlined genomic organization that may influence its adaptability and replication. Notably, C. werkmanii does not undergo sporulation, which is a reproductive strategy that allows some bacteria to survive unfavorable conditions. The lack of sporulation in this species could indicate a reliance on stable environments or specific ecological niches where it can effectively compete for resources. The accession number for this strain is BBMW00000000.1, providing a reference for genomic and taxonomic studies. Understanding the traits of C. werkmanii can provide insights into its ecological roles, particularly in nutrient cycling within its habitat. Its ability to thrive in mesophilic conditions and its chemoheterotrophic nature suggest that it may play a significant role in the decomposition of organic material, contributing to soil health and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter werkmanii
StrainNBRC 105721

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter werkmanii NBRC 105721
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Citrobacter werkmanii NBRC 105721 DNA, contig: CIWKM30, whole

Gene Summary

Adenine Count

1191229 bp

Thymine Count

1180129 bp

Guanine Count

1276258 bp

Cytosine Count

1300381 bp

Genome Length

4947997 bp

Protein-coding Genes

4499 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component response regulator phopCIWKM_07_03140Not AvailablePositive1610237 - 161091125592.8
two-component histidine kinase phoqCIWKM_07_03150Not AvailablePositive1610911 - 161237455324.7
hypothetical protein ycfdCIWKM_07_03160Not AvailablePositive1612467 - 161358842743.4
peptidase tCIWKM_07_03170Not AvailableNegative1613693 - 161491944647.8
spermidine/putrescine abc transporter atp-binding proteinCIWKM_07_03180Not AvailablePositive1615170 - 161630642944.7
spermidine/putrescine abc transporter permease protein potbCIWKM_07_03190Not AvailablePositive1616320 - 161714731100.9
spermidine/putrescine abc transporter permease protein potcCIWKM_07_03200Not AvailablePositive1617144 - 161792328494.1
spermidine/putrescine abc transporter substrate-binding proteinCIWKM_07_03210Not AvailablePositive1617948 - 161899739113.3
nad-dependent protein deacetylaseCIWKM_07_03220Not AvailableNegative1619100 - 161992131051.3
n-acetyl-d-glucosamine kinaseCIWKM_07_03230Not AvailableNegative1619937 - 162084832990.4

Displaying genes 1581 – 1590 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.