Citrobacter werkmanii NBRC 105721

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter werkmanii NBRC 105721 is a gram-negative, rod-shaped bacterium recognized for its chemoheterotrophic metabolism, utilizing organic compounds as its primary energy source. This species is motile, possessing flagella that facilitate its movement in various environments. C. werkmanii is classified as mesophilic, indicating that it thrives in moderate temperature ranges, which are typically conducive to microbial growth and activity. The organism has a single replicon, suggesting a streamlined genomic organization that may influence its adaptability and replication. Notably, C. werkmanii does not undergo sporulation, which is a reproductive strategy that allows some bacteria to survive unfavorable conditions. The lack of sporulation in this species could indicate a reliance on stable environments or specific ecological niches where it can effectively compete for resources. The accession number for this strain is BBMW00000000.1, providing a reference for genomic and taxonomic studies. Understanding the traits of C. werkmanii can provide insights into its ecological roles, particularly in nutrient cycling within its habitat. Its ability to thrive in mesophilic conditions and its chemoheterotrophic nature suggest that it may play a significant role in the decomposition of organic material, contributing to soil health and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter werkmanii
StrainNBRC 105721

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter werkmanii NBRC 105721
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Citrobacter werkmanii NBRC 105721 DNA, contig: CIWKM30, whole

Gene Summary

Adenine Count

1191229 bp

Thymine Count

1180129 bp

Guanine Count

1276258 bp

Cytosine Count

1300381 bp

Genome Length

4947997 bp

Protein-coding Genes

4499 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical protein ynjhCIWKM_07_01720Not AvailableNegative1487504 - 148777910169.3
nadp-dependent glutamate dehydrogenaseCIWKM_07_01730Not AvailablePositive1488017 - 148936048567.3
dna topoisomerase iiiCIWKM_07_01740Not AvailableNegative1489450 - 149139672912.4
selenide, water dikinaseCIWKM_07_01750Not AvailableNegative1491401 - 149244436452.2
putative nitroreductase ydjaCIWKM_07_01760Not AvailableNegative1492561 - 149311220044.1
protease ivCIWKM_07_01770Not AvailablePositive1493287 - 149514367022.9
putative arac family transcriptional regulatorCIWKM_07_01780Not AvailableNegative1495140 - 149623139747.1
hypothetical proteinCIWKM_07_01790Not AvailableNegative1496228 - 149716333635.5
l-asparaginase iCIWKM_07_01800Not AvailablePositive1497364 - 149838036960.2
pyrazinamidase/nicotinamidaseCIWKM_07_01810Not AvailablePositive1498394 - 149903222900.8

Displaying genes 1501 – 1510 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.