Pseudonocardia sp. EC080619-01

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia sp. EC080619-01 is characterized by its rod-shaped morphology, which is a common feature within the genus Pseudonocardia. This species possesses three replicons, indicating a complex genomic structure that may contribute to its adaptability and metabolic versatility. The genomic data for Pseudonocardia sp. EC080619-01 can be accessed through several accession numbers: NZ_CP012185.1, NZ_CP012184.1, and NZ_CP012186.1. These accessions represent distinct segments of its genome, which can provide insights into the organism's genetic makeup and potential functional capabilities. In terms of biological and ecological significance, Pseudonocardia species are known for their role in soil ecosystems, particularly in the degradation of organic materials and the cycling of nutrients. Their rod shape could be advantageous for motility and colonization in various environmental niches. Understanding the genomic characteristics and ecological roles of Pseudonocardia sp. EC080619-01 could illuminate its contributions to soil health and microbial diversity, as well as its potential applications in bioremediation processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. EC080619-01
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence.

Gene Summary

Adenine Count

32009 bp

Thymine Count

32530 bp

Guanine Count

71584 bp

Cytosine Count

70411 bp

Genome Length

206535 bp

Protein-coding Genes

210 genes

Non-Coding Genes

20 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidophosphoribosyltransferaseAD017_RS11280Not AvailableNegative2411903 - 241347756087.3
sterol carrier family proteinAD017_RS11285Not AvailableNegative2413612 - 241394411614.7
phosphoribosylformylglycinamidine synthase subunit purlAD017_RS11290Not AvailableNegative2413952 - 241625279013.0
phosphoribosylformylglycinamidine synthase subunit purqAD017_RS11295Not AvailableNegative2416337 - 241700823209.5
phosphoribosylformylglycinamidine synthase subunit pursAD017_RS11300Not AvailableNegative2417005 - 24172388362.1
nad-dependent epimerase/dehydratase family proteinAD017_RS11305Not AvailablePositive2417301 - 241831134757.1
mbl fold metallo-hydrolaseAD017_RS11310Not AvailablePositive2418393 - 241903422388.4
voc family proteinAD017_RS11315Not AvailablePositive2419034 - 241941413971.7
duf2334 domain-containing proteinAD017_RS11320Not AvailableNegative2419503 - 242026126664.9
gold/dthd family dehydrogenaseAD017_RS11325Not AvailableNegative2420350 - 242106924179.8

Displaying genes 3331 – 3340 of 6774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.