Pseudonocardia sp. EC080619-01

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia sp. EC080619-01 is characterized by its rod-shaped morphology, which is a common feature within the genus Pseudonocardia. This species possesses three replicons, indicating a complex genomic structure that may contribute to its adaptability and metabolic versatility. The genomic data for Pseudonocardia sp. EC080619-01 can be accessed through several accession numbers: NZ_CP012185.1, NZ_CP012184.1, and NZ_CP012186.1. These accessions represent distinct segments of its genome, which can provide insights into the organism's genetic makeup and potential functional capabilities. In terms of biological and ecological significance, Pseudonocardia species are known for their role in soil ecosystems, particularly in the degradation of organic materials and the cycling of nutrients. Their rod shape could be advantageous for motility and colonization in various environmental niches. Understanding the genomic characteristics and ecological roles of Pseudonocardia sp. EC080619-01 could illuminate its contributions to soil health and microbial diversity, as well as its potential applications in bioremediation processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. EC080619-01
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence.

Gene Summary

Adenine Count

32009 bp

Thymine Count

32530 bp

Guanine Count

71584 bp

Cytosine Count

70411 bp

Genome Length

206535 bp

Protein-coding Genes

210 genes

Non-Coding Genes

20 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAD017_RS09465Not AvailablePositive2046343 - 20465707761.26
cystathionine gamma-synthaseAD017_RS09470Not AvailableNegative2046598 - 204774340022.5
cystathionine beta-synthaseAD017_RS09475Not AvailableNegative2047773 - 204914047982.0
pyridoxamine 5'-phosphate oxidase family proteinAD017_RS09480Not AvailableNegative2049160 - 204962116323.2
acetyl-coa c-acetyltransferaseAD017_RS09485Not AvailablePositive2049732 - 205095242805.8
rok family transcriptional regulatorAD017_RS09490Not AvailablePositive2051265 - 205243740274.4
sugar porter family mfs transporterAD017_RS09495Not AvailablePositive2052646 - 205408550336.8
duf2267 domain-containing proteinAD017_RS33300Not AvailablePositive2054214 - 205462414232.4
hypothetical proteinAD017_RS09500Not AvailableNegative2054638 - 205509016287.0
bax inhibitor-1/ycca family membrane proteinAD017_RS09505Not AvailableNegative2055268 - 205607427866.7

Displaying genes 2961 – 2970 of 6774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.