Marinobacter manganoxydans MnI7-9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter manganoxydans MnI7-9 is a bacterial species characterized by the presence of flagella, which likely contributes to its motility in aquatic environments. The organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genomic data for Marinobacter manganoxydans MnI7-9 is accessible under the accession number AGTR00000000.1. The presence of flagella suggests that Marinobacter manganoxydans MnI7-9 is capable of actively navigating its environment, potentially enhancing its ability to access nutrients or evade unfavorable conditions. This motility could be particularly advantageous in the marine ecosystems where this bacterium is typically found, facilitating interactions with other microorganisms and contributing to biogeochemical processes. Marinobacter species are often associated with the degradation of organic matter and the cycling of elements in marine environments, including manganese. The unique trait of manganese oxidation observed in Marinobacter manganoxydans MnI7-9 may play a significant role in the biogeochemical cycling of manganese, influencing its availability and transformation in marine sediments. The ecological implications of this organism's manganese-oxidizing capabilities could be crucial for understanding nutrient dynamics and microbial interactions in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter manganoxydans
StrainMnI7-9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter manganoxydans MnI7-9


Gene Summary

Adenine Count

972003 bp

Thymine Count

971178 bp

Guanine Count

1298950 bp

Cytosine Count

1307459 bp

Genome Length

4549590 bp

Protein-coding Genes

4203 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive11 - 125Not Available
vbcs repeat-containing proteinKYE_00005Not AvailableNegative1 - 16683567321.0
lipocalin family proteinKYE_00010Q08790Negative17349 - 1785819442.4
nad-dependent epimerase/dehydrataseKYE_00015P39858Negative17947 - 1895437617.4
hypothetical proteinKYE_00020Not AvailableNegative18983 - 1971125957.2
phosphoribosylaminoimidazole-succinocarboxamide synthaseKYE_00025A1U1A4Negative19744 - 2045726981.3
hypothetical proteinKYE_00030Not AvailableNegative20502 - 2159940720.8
dihydrodipicolinate synthaseKYE_00035A1U1A6Negative21635 - 2251331214.8
alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergenKYE_00040Q796Y8Positive22588 - 2305517604.0
hypothetical proteinKYE_00045P43969Negative23063 - 2414239173.5

Displaying genes 1 – 10 of 4251 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

273 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da

Displaying 1–10 of 273 metabolites

Health Effects

No health effects information available for this bacterium.